Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 361 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivM from Phaeobacter inhibens DSM 17395

 Score =  170 bits (431), Expect = 5e-47
 Identities = 128/352 (36%), Positives = 178/352 (50%), Gaps = 18/352 (5%)

Query: 9   FKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNI 68
           FKTSY  D + FP     + Y  ++ +A+ + P +IN+++   V    LIWAIA +GL +
Sbjct: 5   FKTSYDHDIRLFPDRHSLLVYGALVMLALAL-PLLINEFYIGEV-TNVLIWAIAGLGLML 62

Query: 69  LTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRI 128
           LTG  GQ SLG   F+A+G YA   L+     L   +   L GVIT  VG +  +P+LR+
Sbjct: 63  LTGQTGQASLGHAAFLAIGCYANTILIE--QGLPFIVAFPLAGVITGIVGGIIAIPALRL 120

Query: 129 KGFYLAVATLA----AQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNADAAP 184
            G YLA+AT+A    A   +V L    PW      SG+     R +FG  I         
Sbjct: 121 HGIYLAIATIALSILADDIIVLL---EPW--TGGVSGKFPDVIR-LFGIEIERWTMPVRF 174

Query: 185 KYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244
            YL       +     RNL R  +GR++ A+RD +++A  +GV+  + K TAF +S    
Sbjct: 175 YYL-VFGVTVICTLFYRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMIT 233

Query: 245 GVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKN 304
           G AGAL    Y GA    E F +  S  +L MI+IGGLGSI G+  GA  +  LP  L  
Sbjct: 234 GWAGAL-MGYYAGAFN-NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSI 291

Query: 305 VMVGSLGWDTAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWPF 356
           +    LG   AI    E  V G ++I F++ EP GL   W   +    L+PF
Sbjct: 292 LKDSVLGSGVAIPG-LETGVFGMILILFILFEPMGLYGRWLKIRIWFELFPF 342