Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 331 a.a., amino acid-binding periplasmic signal peptide protein from Sinorhizobium meliloti 1021

 Score =  348 bits (894), Expect = e-101
 Identities = 168/328 (51%), Positives = 216/328 (65%), Gaps = 1/328 (0%)

Query: 11  AAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAVAAAVF 70
           A A LA T A A TL+ V+ RG + CG+S G++GF++ D  GEW GFD+  CRAVAAA  
Sbjct: 5   ATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAATL 64

Query: 71  GDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGFMVP 130
           G P  V + P++ + RF  L SGE+D+L+R TTWT SRD DL + F G+NYYDGQ FMV 
Sbjct: 65  GSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVR 124

Query: 131 KALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQYLAGACD 190
             +GV S  EL GA+VC + GTTTE N+AD+F AN I ++ +    A +  Q + +G CD
Sbjct: 125 GDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNSGRCD 184

Query: 191 VYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALIAAE 250
           VY+TDAS L + R +   PD  VVLPE+ISKEPLGP VR GD++W  +VRWTL A+I AE
Sbjct: 185 VYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMIEAE 244

Query: 251 ELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGGNYGEIFETHI 310
           ELG+T  N A L       +  R LG +   G+ LGL   WA   + A GNYGEIFE H+
Sbjct: 245 ELGITRENAASLLESGTAAQ-KRFLGIDNEAGKALGLDPKWAYQTVAAVGNYGEIFERHL 303

Query: 311 GENTPIGLARGLNAQWTEGGLLYAPPFR 338
           G+ + + + RGLN  W  GGL+YAPP R
Sbjct: 304 GKESALRIDRGLNKLWNNGGLIYAPPVR 331