Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 347 a.a., glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein from Marinobacter adhaerens HP15

 Score =  387 bits (994), Expect = e-112
 Identities = 187/338 (55%), Positives = 242/338 (71%), Gaps = 3/338 (0%)

Query: 3   KSVLFG-ALAAAGLAATGA-AADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVA 60
           KS+  G ALA    +ATGA AA TLE V+ +G + CG+++GL GF+  D  G W G DV 
Sbjct: 11  KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70

Query: 61  VCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGIN 120
            CRAVAAA+FGD  AV F P+T + RF  L SGEIDML+RNTTWT +RD  L L F G+N
Sbjct: 71  TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130

Query: 121 YYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEA 180
           YYDGQGF++ K +GV  AT+LDGAT+CIQ GTTTELNL+D+FRA  + F+P+   T+ + 
Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190

Query: 181 QQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVR 240
            Q + AG CDV T+D S LAA R+    P    +LP  ISKEPLGP+VR GD++W +IV+
Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250

Query: 241 WTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGG 300
           W L A I AEELGVTSAN  ++   +DNP I RLLGT+G++G +LGL  D+    +K  G
Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTDGDMGAKLGLPDDFGYQAVKLVG 309

Query: 301 NYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338
           NYGE+++ ++G +TP+GL RG+NA WTEGG++YAPP R
Sbjct: 310 NYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347