Pairwise Alignments

Query, 318 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 336 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (NCBI) from Rhodospirillum rubrum S1H

 Score =  326 bits (835), Expect = 5e-94
 Identities = 168/310 (54%), Positives = 223/310 (71%), Gaps = 2/310 (0%)

Query: 5   PLTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHEIVHNKYVVDGLRAKGAVFVKE 64
           P+ + LA PRGFCAGV RAI+IV+  LE +G PVYVRHEIVHNK+VVD LRA+GAVFV E
Sbjct: 18  PIRVILANPRGFCAGVTRAIEIVDKCLELYGPPVYVRHEIVHNKHVVDSLRARGAVFVDE 77

Query: 65  LDDCPDDRPVIFSAHGVPKAVPAEATRREMVYVDATCPLVSKVHIEAERHHAGGLQMVMI 124
           LD+ P     +FSAHGV KAV  +A +R++  VDATCPLVSKVH E + H A G ++V+I
Sbjct: 78  LDEVPHGAVTVFSAHGVSKAVINDAKQRQLPVVDATCPLVSKVHKEGQNHAARGREVVLI 137

Query: 125 GHAGHPETVGTMGQLPDGEVILVETVADVATITPRDPDKLAFITQTTLSVDDTADIVAAL 184
           GHAGHPE  GT GQ+P G V LV   +DV  +  RDP+ LA++TQTTLSVDDT +++ AL
Sbjct: 138 GHAGHPEVEGTQGQIPGG-VYLVSAASDVDGLVVRDPENLAYVTQTTLSVDDTREVIEAL 196

Query: 185 QARFPAIVGPHKEDICYATTNRQGAVKAMAPKADAMLVIGAPNSSNSKRLVEVGRSAGCA 244
           + RFPAIVGP  +DICYAT NRQ AV+ +A +AD +LV+G+ NSSNS RL E+G   G  
Sbjct: 197 KLRFPAIVGPDVKDICYATQNRQSAVREIAREADLLLVVGSRNSSNSNRLREIGAEMG-K 255

Query: 245 YAQLVQRAEDIDWRALEGISSIGITAGASAPEVLVNEVIEAFRTRFDLTVEQVETAQENV 304
            + L+  AE +    +EG++++ +TAGASAPE LV  +I+       + V +    +E+ 
Sbjct: 256 PSFLIADAEALRPEWMEGVATVAVTAGASAPEALVQGLIDRLGDFGRVEVIEQAGVEEHT 315

Query: 305 EFKVPRVLRE 314
           +FK+PR+L++
Sbjct: 316 QFKLPRILQD 325