Pairwise Alignments

Query, 318 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 330 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Bifidobacterium breve UCC2003

 Score =  266 bits (680), Expect = 5e-76
 Identities = 156/327 (47%), Positives = 207/327 (63%), Gaps = 23/327 (7%)

Query: 7   TLYLAAPRGFCAGVDRAIKIVEMAL-----------EKWGAPVYVRHEIVHNKYVVDGLR 55
           ++ LA PRGFCAGVDRAI  V+  L           E    PVYVR +IVHNK+VV+ L 
Sbjct: 4   SVVLADPRGFCAGVDRAILTVQTILKAAESSGKLHREDGLPPVYVRRQIVHNKHVVEDLA 63

Query: 56  AKGAVFVKELDDCPDDR-----PVIFSAHGVPKAVPAEATRREMVYVDATCPLVSKVHIE 110
            +GAVFV+EL + PD       PV+FSAHGV   V +EA RR M  VDATCPLV KVH E
Sbjct: 64  GQGAVFVQELSEIPDAAAAAGIPVVFSAHGVSPVVKSEAQRRGMHVVDATCPLVGKVHRE 123

Query: 111 AERHHAGGLQMVMIGHAGHPETVGTMGQLPDGEVILVETVADVATITPRDPDKLAFITQT 170
             R    G ++V IGH GH E VG +G+ P+  V L+E  +DV ++      KL  ++QT
Sbjct: 124 VLRFVREGYEIVYIGHKGHDEAVGVVGESPE-HVHLIEHESDVDSLDFAPDTKLVLLSQT 182

Query: 171 TLSVDDTADIVAALQARFPAIVGPHKEDICYATTNRQGAVKAMAPKADAMLVIGAPNSSN 230
           TLSVD+TA  +AAL+ARFP I  P   DICYAT+NRQ AVK +A ++D ++++G+ NSSN
Sbjct: 183 TLSVDETAGTIAALKARFPWIEEPPSSDICYATSNRQAAVKLVAQQSDCVVIVGSANSSN 242

Query: 231 SKRLVEVGRSA----GCAYAQLVQRAEDIDWRALEGISSIGITAGASAPEVLVNEVIEAF 286
           S RL+EV +      G AY   V  A ++D    EG+ S+GI++GAS P+ LV+ VI+  
Sbjct: 243 SVRLMEVAQEGLGERGKAYR--VDDANELDPSWFEGVESVGISSGASVPDELVSGVIDTL 300

Query: 287 RTRFDLTVEQVETAQENVEFKVPRVLR 313
           R +    ++ VET +EN+ F +P  LR
Sbjct: 301 RNQGFTGMKSVETIKENMHFVLPAELR 327