Pairwise Alignments

Query, 1150 a.a., chromosome segregation protein SMC (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1135 a.a., condensin subunit Smc from Sphingomonas koreensis DSMZ 15582

 Score =  752 bits (1942), Expect = 0.0
 Identities = 507/1184 (42%), Positives = 660/1184 (55%), Gaps = 85/1184 (7%)

Query: 1    MRFTRLRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60
            ++  RLRL GFKSFVDP DL I  GLTG+VGPNGCGKSNLLEALRW MGEN   +MRG G
Sbjct: 1    VQIKRLRLTGFKSFVDPADLRIEPGLTGIVGPNGCGKSNLLEALRWTMGENSAKSMRGAG 60

Query: 61   MEDVIFAGAASRPARNFAEVALILDNSDRRAPAGFNDTDQLEIIRRITRDVGSAYKTNGK 120
            MEDVIFAG A+RP R+FAEV+++ +           D  +LE++RRI R  GSAY+ NG+
Sbjct: 61   MEDVIFAGTATRPQRDFAEVSILAEQP--------GDDGELEVVRRIERGAGSAYRINGR 112

Query: 121  DVRARDVQMLFADASTGAHSPALVRQGQISELINAKPKARRRILEEAAGISGLYQRRHEA 180
            DVRA+DV +LFAD++TGAHSPALV QG+I  +I AKP  RR++LEEAAGISGL+ RR +A
Sbjct: 113  DVRAKDVALLFADSATGAHSPALVSQGRIGAIIMAKPGERRQMLEEAAGISGLHVRRKDA 172

Query: 181  ELKLRGAETNLDRVDDVLEALAAQLATLARQAKQAARYREIGAQLRRAEGLLLYRRWREA 240
            E KLR  E NL R+D+V+    A+ + L RQA+QA RYRE+  ++R AEG +++ RWREA
Sbjct: 173  EQKLRATEANLTRLDEVIGDQEARASALKRQARQAERYRELSDKIRTAEGRMIFARWREA 232

Query: 241  DETRLVAVGELTARTTEAAAAETAARQAAKARVAADEALPPLREEEAIAGAVVQRLHVQR 300
                             A+AA+ A ++AA A     E         A    V  RL   R
Sbjct: 233  -----------------ASAADAAKKEAAAAEARVAERTQAQENALAAQREVADRLASAR 275

Query: 301  DTLADQETRAREAIETLTG-----------------RIATLEADIAREEELNRDAGETIA 343
                    RA EA+  L G                   A LE D  RE  L  DA + +A
Sbjct: 276  GAALAVRDRASEAMHALAGLRGERASVERRIAELADSAARLEGDKGREGALAHDAADALA 335

Query: 344  KLDWEQAQIAKASVGHDEKLAAAAEAAQAASEVLTDRETTQSEMTEDVARLAARHQSTQR 403
            +L+ ++A++  A +   +    + E+A A +E     E+  +E+    A  A   ++ + 
Sbjct: 336  RLE-DEARVLDARIKDAQARMPSLESASARAE----GESRDAEVGLAQALSAQASETAEA 390

Query: 404  LLQEA------GRAETRAQEQVGRAEAALSEAQAGLCDAETRFVAAERDQQAAQGETEAA 457
             + EA      GR E RA+  V R  A +          E R  AA+ D+  A+ + E A
Sbjct: 391  RVAEAAFTSARGRVE-RAERDVARVAAEIHALGDPAPLKEARTKAAD-DKAKAERQAETA 448

Query: 458  EAALAAAEAERSEVQGAEAEARAARSEAEGEATALRAEVGALEKLVDRARAEGGQVLDAV 517
               LA A+A       A   A++AR+EA  E   L +E  AL K    +  +  ++LD +
Sbjct: 449  RTGLARADATERGAIDARTRAQSARAEAHAELAQLDSEAAALTKATRPSGKD--RLLDRL 506

Query: 518  TAAPGYEAALGAALADDLKA---PEVEGDRSGWHLLPGYDAAQKLPDGAAPLSAHVEVPA 574
               PGYE AL AAL DDL+A   P  E   +G  +L G   A   P G  PL+ HVE P 
Sbjct: 507  KVDPGYERALAAALGDDLEAGLDPADERHWAGAEVLKGDPGA---PSGTTPLARHVEAPG 563

Query: 575  VLARRMAQVGLVDRAEGARLQPALKPGQRLVSREGDLWRWDGLAARAEDAPSAAAARLQQ 634
            VLARR+AQV + +  +G   QP L  GQRLV+  G L RWDG  A++  A  AAA RL++
Sbjct: 564  VLARRLAQVLVTESDDG---QP-LAVGQRLVTLAGVLRRWDGYVAKSGGA--AAAERLER 617

Query: 635  INRLAALK----ADLEAAEAKAATARATHEGLQAAMRAATEADRAAREARKGAERALGEA 690
            +NRL  ++    A + A +A  A        +  A RAA E  R    +    E A  EA
Sbjct: 618  VNRLRTIEKARPAAVRAVDAADAELARIDGDIAEARRAAAECKRLLDHS----ETAAREA 673

Query: 691  SRALSRAEADRNIMAGKLETLGSAVSRYRDEVLEARKAVAEAQAAQADLGDLEAARAQVE 750
            +RA  RA A    + G+   L +  +R   E+ EA   +  A+AA+A L D  A RA+V 
Sbjct: 674  ARAEDRAAAALERLDGQRADLEARRARTAAELEEASGELKRAEAARAALPDGSATRARVA 733

Query: 751  AVRVTVDAARMTMLAKRSAHDELRREGEARTRRSQEITTQISGWRHRLETAEAHKGELEG 810
            A+    +A R      R+    L RE      R      +   W+ R   A     E++ 
Sbjct: 734  ALTAEAEARRNAAANARAERGNLEREMATARERLAASIAESKSWKARAGEAAKRIAEMDA 793

Query: 811  RLEASRAELKSATAAPEEIAAKRDA--LAHEIARAEARKAAAADALST--AEGAARSAEQ 866
            R      EL  A  A ++  A+ D   L  E A  EAR  +AA  L+   AEGA R  E 
Sbjct: 794  RA----IELAEAAEALKDKPAQLDEAILLAEKANEEARIESAAAQLAEREAEGALRETEG 849

Query: 867  AERDAERAASEAREARARAEARAEAAAETVTLAAERIQEALEVTPQQLLDTLKVGPDAMP 926
            A R A  A +EARE RA A AR E              E  E  P  L +      + + 
Sbjct: 850  AVRAAGEALAEAREGRAGAVARHENQEMRRIEMGRLSGERFECPPPLLPERAGFAEETVR 909

Query: 927  ASDAIEAEVNRLKRQREAMGAVNLRAEEDAKAVEEEYDGLVAEKGDLEGAIGKLRTGISS 986
                  A  +RL  +RE +G VNL AE +   +         E+ +L  A+ +LR  I +
Sbjct: 910  GPQDESAAHDRLIAERERIGPVNLVAETELAELTASAQNSARERDELIQAVHRLRGSIGT 969

Query: 987  LNKEGRERLLTAFEQVNDNFAMLFTHLFGGGEAKLVLVESDDPLEAGLEIMCQPPGKRLS 1046
            LN+EGR+RLL AFE V+ +F  LFT LF GG+A L LV+SDDPLEAGLEIM QPPGK+L 
Sbjct: 970  LNREGRQRLLAAFEAVDQHFRRLFTTLFNGGQAHLELVDSDDPLEAGLEIMAQPPGKKLQ 1029

Query: 1047 TLSLLSGGEQTLTALALIFAVFLANPAPICVLDEVDAPLDDANVTRFCDLLDEMTRRTET 1106
            +L+LLSGGEQ LTA+ALIFA+FL NPAPICVLDEVDAPLDDAN+ RFCDLLD MTR T T
Sbjct: 1030 SLTLLSGGEQALTAVALIFALFLTNPAPICVLDEVDAPLDDANIERFCDLLDAMTRETAT 1089

Query: 1107 RFLIITHHAVTMARMDRLFGVTMGEQGVSQLVSVDLRKAESLVA 1150
            R+LI+TH+A TM+RM RLFGVTM E+GVS+LVSVDL  AESL+A
Sbjct: 1090 RYLIVTHNAATMSRMHRLFGVTMVERGVSRLVSVDLGGAESLLA 1133