Pairwise Alignments

Query, 1150 a.a., chromosome segregation protein SMC (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1215 a.a., chromosome segregation protein SMC from Bifidobacterium breve UCC2003

 Score =  345 bits (884), Expect = 2e-98
 Identities = 344/1257 (27%), Positives = 543/1257 (43%), Gaps = 155/1257 (12%)

Query: 1    MRFTRLRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60
            M    L L GFKSF   T L    G+T VVGPNG GKSN+++AL WVMGE     +RG  
Sbjct: 1    MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60

Query: 61   MEDVIFAGAASRPARNFAEVALILDNSDRRAPAGFNDTDQLEIIRRITRDVGSAYKTNGK 120
            MEDVIFAG +SRP    A+V+L +DNSD        D  ++ I R I R+ GS Y  NG 
Sbjct: 61   MEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDI---DYTEVTISRTIFRNGGSEYAINGS 117

Query: 121  DVRARDVQMLFADASTGAHSPALVRQGQISELINAKPKARRRILEEAAGISGLYQRRHEA 180
              R  D+Q L +D   G     +V QG++  ++ A P   R  +EEAAGI    +R+  A
Sbjct: 118  QCRLLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERA 177

Query: 181  ELKLRGAETNLDRVDDVLEALAAQLATLARQAKQAARYREIGAQLRRAEGLLLYRRWREA 240
              KL   E+NL+R+DD+L  +  QL  L RQA+ + R   I   +R A+  +     + +
Sbjct: 178  LRKLANTESNLNRLDDLLREIHRQLGPLGRQARISRRADAIQVSVRDAQARIYAEDAQRS 237

Query: 241  DETRLVAVGELTARTTEAAAAETAARQAAKARVAADEALPPLREEEAIA--GAVVQRLHV 298
               R     EL    ++ + A+    Q  K R+   EAL       AIA           
Sbjct: 238  MARRETVRKELGDVRSQLSVAQRELAQ-VKVRIEQVEALSS-ESSPAIAKTNQYWHEFSQ 295

Query: 299  QRDTLADQETRAREAIETLTGRIATLEAD-----IAREEELNRDAGETIAKLDWEQAQIA 353
             R+ L      A E   +LTG+I +   +     + R +EL   A      +   +  + 
Sbjct: 296  IRERLHALAQLAEERGHSLTGQIVSNFGEDPDMLLKRAKELETQAAAQTKAVADARIALD 355

Query: 354  KASVGHDEKLAAAAEAAQAASEVLTDRETTQSEMTEDVA---RLAARHQSTQRLLQEAGR 410
            KA+    E+ A   +   +  + LT+   T  E    +A    L AR +S  +L      
Sbjct: 356  KAT----EERADDEKKLASIRQTLTELRKTAQERDAHIASLRELIAREESAVQL------ 405

Query: 411  AETRAQEQVGRAEAALSEAQAGLCDAETRFVAAERDQQAAQGETEAAEAALAAAEAERSE 470
            A++RA++  G+ E    +      DA+ +  +   + Q+   +  AA     AA AER +
Sbjct: 406  ADSRAKDHTGQRETLAKQHD----DAQHQLESLRSEAQSVADDDGAALDKARAALAERRD 461

Query: 471  VQGAEAEARAARSEAEGEATALRAEVGALEKLVDRARAEG-----------GQVLDAVTA 519
            V     E    + + + +  +L+A+  AL   +D   A G           G++ D +  
Sbjct: 462  VLN---ELTDRQRDVQSKIISLQAKADALSDTLDSRNASGSLERDEQVASLGRLTDFIHV 518

Query: 520  APGYEAALGAAL---ADDLKAPE----------VEGDRSG----WHLLPGYDAAQKLPD- 561
            A G+E A+  AL   A  +  PE             D+ G      ++P  +    L D 
Sbjct: 519  ADGWEEAVAHALDQYASAIVVPETGNMLHALERAREDKLGKAVVLTVMPADEPFAALADT 578

Query: 562  --------GAAPLSAHVEVPAVLARR----MAQVGLVDRAEGARLQPALKPGQRLVSREG 609
                     A P ++     A   R     +A V   + A+ A+   A     R V++ G
Sbjct: 579  DICLANLVTANPEASDKTQAAACVRTVQLLLADVAAAETADEAQRLVASGKAPRAVTKHG 638

Query: 610  DLWRWDGLAARAEDAPSAAAARLQQINRLAALKADLEAAEAKAATARATHEGLQAAMRAA 669
            + +        A    +   + + Q +   A + D   A+ K     A +E  +    A 
Sbjct: 639  ETF--------AHGVAAVGGSSISQSDLSLAARRDKALAQVKQLGVEA-NELAEQVSEAK 689

Query: 670  TEADRAAR----EARKGAERAL--GEASRALSRAEADRNIMAGKLETLGSAV-------S 716
            ++ D AAR    E+ K  E  L   +A ++L  AE      A +LE L   +       +
Sbjct: 690  SKRDEAARLVDQESAKRTEVRLKAQQAEKSLKSAEDRVASFARQLEQLDKKIADTQENRN 749

Query: 717  RYRDEVLEARKAVAEAQAAQADLGDLEAARAQVEAVRVTVDAARMTMLAKRSAHDELRRE 776
             ++ ++ +  +A+  AQ +  +  D +    +   +   ++  R   +A + A  E  R+
Sbjct: 750  EHQLKLDDLNRALESAQQSTDEHADFDELDERERTLERDLNLTREHEVAAKIAWTEASRK 809

Query: 777  GEARTRRS---QEITTQISGWRHRLETAEAHKGELEGRLEASRAELKSATAAPEE----I 829
            GE+ TR++   ++   +    R R+E+    + +    L+    + +   A  E     +
Sbjct: 810  GESLTRQAGLLRDNAKEAVERRARIESLNERRRDQAAHLQGVADDAREVAAMVERTLQGV 869

Query: 830  AAKRDALAHEIARAEARKAAAADALSTAEGAARSAEQAERD--AERAASEAREARARAEA 887
            AA+RD L       +   ++  D L T        E    D      A +    R  AEA
Sbjct: 870  AAERDKL-------QEAASSHDDELKTLRAQRNEIEPKVTDLTGREHALDVNRERLAAEA 922

Query: 888  --RAEAAAETVTLAAERIQEALEVTPQQLLDTLKVGPDAMP---------------ASDA 930
                +  ++ + L  E +    E  P Q +  L    + +P               A+DA
Sbjct: 923  GQLMQKVSDELGLTLEEL--VREYGPDQPVPVLDDDGNPVPLEHMDGEGDGNADDAATDA 980

Query: 931  IEAEVN-----------------------RLKRQREAMGAVNLRAEEDAKAVEEEYDGLV 967
             +A  N                       + +R   A+G +N  A E+ +A+EE    L 
Sbjct: 981  PDAAANSVTDPSRFQTVPYNRQEQQKRLDKARRDLAALGKINPLATEEFEALEERNKYLN 1040

Query: 968  AEKGDLEGAIGKLRTGISSLNKEGRERLLTAFEQVNDNFAMLFTHLFGGGEAKLVLVESD 1027
             ++ D+  +   L   I  L+    E   +AF+   + F  +F  LF GG  +L L   +
Sbjct: 1041 DQRNDVVKSRDDLMQLIKDLDSTMVEVFKSAFDDTAEAFEKMFATLFPGGTGRLRLENPE 1100

Query: 1028 DPLEAGLEIMCQPPGKRLSTLSLLSGGEQTLTALALIFAVFLANPAPICVLDEVDAPLDD 1087
            D L  G+ +   P GKR+  LSLLSGGE++LTALAL+FA+F A P+P  V+DEV+A LDD
Sbjct: 1101 DLLTTGVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEVEAALDD 1160

Query: 1088 ANVTRFCDLLDEMTRRTETRFLIITHHAVTMARMDRLFGVTMGEQGVSQLVSVDLRK 1144
             N+TR  D  +E+  R   + +IITH   TM+  D L+GVTM   GV+ +VS  L K
Sbjct: 1161 VNLTRLIDAFNEL--RAHAQLIIITHQQRTMSIADALYGVTMRADGVTAVVSQKLDK 1215