Pairwise Alignments

Query, 1150 a.a., chromosome segregation protein SMC (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1172 a.a., chromosome segregation protein SMC from Burkholderia phytofirmans PsJN

 Score =  473 bits (1217), Expect = e-137
 Identities = 376/1200 (31%), Positives = 575/1200 (47%), Gaps = 91/1200 (7%)

Query: 1    MRFTRLRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60
            MR T ++L GFKSFVDPT   +   L GVVGPNGCGKSN+++A+RWV+GE+R + +RG  
Sbjct: 1    MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60

Query: 61   MEDVIFAGAASRPARNFAEVALILDNSDRRAPAGFNDTDQLEIIRRITRDVGSAYKTNGK 120
            M+DVIF G+ +R   + A V L+ DN+D RA   +    ++ + R +TRD  S+Y  N  
Sbjct: 61   MQDVIFNGSTARKPGSRASVELVFDNADGRAAGQWGQYAEIAVKRVLTRDGTSSYYINNL 120

Query: 121  DVRARDVQMLFADASTGAHSPALVRQGQISELINAKPKARRRILEEAAGISGLYQRRHEA 180
              R RD+Q +F     G  + A++ QG I+ LI AKP+  R  LEEAAG+S   +RR E 
Sbjct: 121  PARRRDIQDIFLGTGLGPRAYAIIGQGMIARLIEAKPEELRVFLEEAAGVSKYKERRRET 180

Query: 181  ELKLRGAETNLDRVDDVLEALAAQLATLARQAKQAARYREIGAQLRRAEGLLLYRRWREA 240
            E +L     NL RV+D++  L++ L  L  QA  A RY+E+       + LL   R  EA
Sbjct: 181  ENRLHDTRENLTRVEDIVRELSSNLEKLEAQAVVATRYKELQTDGEEKQRLLWLLRKNEA 240

Query: 241  D-----ETRLV--AVGELTARTTEAAAAETAARQAAKARVAADEALPPLREEEAIAGAVV 293
                  + R +  A  +L A T +    E        A  +A +A+   +     A + V
Sbjct: 241  GSEQERQQRAIEQAQIDLEAHTAKLREVEAQLETLRVAHYSASDAMQGAQGALYEANSEV 300

Query: 294  QRLHVQRDTLADQETRAREAIETLTGRIATLEADIAREEELNRDAGETIAKLDWEQAQIA 353
             RL  +   + +   RA+  I  L  +    ++   + ++   DA E +A  + E+A +A
Sbjct: 301  SRLEAEIKFIVESRNRAQAQIAALNAQREQWQSQAQKAQDDLEDAEEQLAVAE-EKAALA 359

Query: 354  --KASVGHDEKLAAAAEAAQAASEVLTDRETTQSEMTEDVARLAARHQST---------- 401
              +A+  HD   A  A    A +E+  +R       TE   +L A HQ            
Sbjct: 360  EDEAAAKHDAMPALEARWRDAQTELNAERGGI--AQTEQALKLEAAHQRNADQQLQQLQA 417

Query: 402  --QRLLQEAGRAETRAQEQVGRAEAALSEAQAGLCDAETRFVAAERDQQAAQGETEAAEA 459
              +RL  EAG  +   + Q+      L+E +  L DA+TR   A+       GE   A+ 
Sbjct: 418  RHERLKSEAGGLDAPDEAQLEDLRMQLAEHEEILHDAQTRLSDAQETLPRLDGERRTAQE 477

Query: 460  ALAAAEAERSEVQGAEAEARAARSEAEGEATAL----RAEVGALEKLVDRARAEGGQVLD 515
             + A  A+  ++    A  +  +   + E        + E+G+L +L  +   E      
Sbjct: 478  RVQAESAQIHQLDARLAALKQLQENVQTEGKIQPWLEKHELGSLPRLWKKLHVEA----- 532

Query: 516  AVTAAPGYEAALGAALADDLKAPEVEG-------------DRSGWHLLPGYDAAQKLPDG 562
                  G+EAAL A L + L A EV                +  ++  P        P  
Sbjct: 533  ------GWEAALEAVLRERLAALEVSNLDWVKAFATDAPPAKLAFYAPPVAGQPAATPPA 586

Query: 563  AAPLSAHVEVPAVLARRMAQ--VGLV----DRAEGARLQPALKPGQRLVSREGDLWRWDG 616
              PL + V +     R +    +GL     D  +   ++  L  G   V + G +    G
Sbjct: 587  LRPLLSLVRIDDAGIRAVLNDWLGLSFVADDLQQALAMRSQLPEGGSFVVKAGHVVTRVG 646

Query: 617  LAARAEDAPSAA-AARLQQINRLA-ALKAD-LEAAEAKAATARATHEGLQAAMRAATEAD 673
            +   A D+  A   AR Q+I  LA  ++A  L A EAKAA  RA          A T+A 
Sbjct: 647  VQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKAAAIRAE--------AAHTQAA 698

Query: 674  RAAREARKGAERALGEASRALSRAEADRNIMAGKLETLGSAVSRYRDEVLEARKAVAEAQ 733
            +   +AR+ AER    A++ +   + D   +    E      ++ R+E+ E    + E +
Sbjct: 699  QVLTDARQQAER----ATQRVHALQMDVLKLTQAHERYTQRSTQIREELAEITAQIEEQR 754

Query: 734  AAQADL--------GDLEAARAQVEAVRVTVDAARMTMLAKRSAHDELRREGEARTRRSQ 785
            A +A+         G+L   +A+ E  ++  +A    + A R    +L R        ++
Sbjct: 755  AMRAESEANFERHDGELAELQARFEDHQLAFEALDEQLTAARGQARDLDRAATDARFAAR 814

Query: 786  EITTQISGWRHRLETAEAHKGELEGRLEASRAELKSATAAPEEIAAKRDALAHEIARAEA 845
             +  +I   +  ++ A      +   LE +RAEL++           +DAL     + EA
Sbjct: 815  NMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAH-TGLQDALDIRAVKEEA 873

Query: 846  RKAAAADALSTAEGAARSAEQAERDAERAASEAREARARAEARAEAAAETVTLAAERIQE 905
              AA  + L       R+A++    AERA    R+     + + +AA        E++  
Sbjct: 874  LHAARLE-LDDLTAKLRAADETRLTAERALQPLRDRINELQLKEQAARLNGEQFVEQL-A 931

Query: 906  ALEVTPQQLLDTLKVGPDAMPASDAIEAEVNRLKRQREAMGAVNLRAEEDAKAVEEEYDG 965
            A  V   QL    K+ PD  P+   ++ EV R+     A+G VN+ A ++ KA  E    
Sbjct: 932  AAGVDEAQL--QAKLTPDMKPS--YLQGEVTRINNAITALGPVNMAALDELKAATERKSF 987

Query: 966  LVAEKGDLEGAIGKLRTGISSLNKEGRERLLTAFEQVNDNFAMLFTHLFGGGEAKLVLVE 1025
            L A+  DL  AI  L   I  ++ E R  L   F+QVN +F  LF  LFGGG+AKL++  
Sbjct: 988  LDAQSTDLNSAIETLEDAIRKIDAETRTLLQGTFDQVNHHFGELFPRLFGGGQAKLIMT- 1046

Query: 1026 SDDPLEAGLEIMCQPPGKRLSTLSLLSGGEQTLTALALIFAVFLANPAPICVLDEVDAPL 1085
             D+ L+AG+++M QPPGK+ ST+ LLSGGE+ LTA AL+FA+F  NPAP C+LDEVDAPL
Sbjct: 1047 GDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALTATALVFAMFQLNPAPFCLLDEVDAPL 1106

Query: 1086 DDANVTRFCDLLDEMTRRTETRFLIITHHAVTMARMDRLFGVTMGEQGVSQLVSVDLRKA 1145
            DDAN  RF +L+  M+ +T+  FL I+H+ + M    +L GVTM EQGVS++V+VD+  A
Sbjct: 1107 DDANTERFANLVRAMSDKTQ--FLFISHNKIAMEMAQQLIGVTMQEQGVSRIVAVDMESA 1164