Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 441 a.a., HlyD family type I secretion periplasmic adaptor subunit from Pseudomonas fluorescens SBW25-INTG

 Score =  224 bits (570), Expect = 5e-63
 Identities = 133/420 (31%), Positives = 223/420 (53%), Gaps = 10/420 (2%)

Query: 15  LLIGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGD 74
           L++GG A      GF  W+ +A +   +   G++ V  +R+ VQHP GG+V+RI V +G+
Sbjct: 31  LVLGGFA------GFLGWAALAPLDKGVAVSGKVMVSGHRKTVQHPAGGIVERIDVRDGE 84

Query: 75  TVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATS 134
            V+ G +L++L  T L+  +  +  Q    +A  A L AE +G   + F  ELL      
Sbjct: 85  VVSAGQVLLRLKETPLRGQMQSLRSQYVASLASEARLSAESEGLSAITFAPELL----DD 140

Query: 135 PEVADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIEQEL 194
           PE A  ++ QR+LF +R  ++ TE + L    A    Q+ G    Q +  QQ   + ++L
Sbjct: 141 PEAAATLNLQRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASKVQQRAALSEQL 200

Query: 195 ADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSRR 254
              ++L   G    +R+L  +R  +++ G++ E      + + +  E+ + I  L    +
Sbjct: 201 QGLRALARDGYIPRNRLLDSERLYSQVDGAIAEDYGRIGQLQRQVLELRLRIRHLGEDFQ 260

Query: 255 EEAISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAEPVL 314
           ++   +L +T+ +  +L+ +  +    L+   +RAP  G+V  L V+ E  VI+P + ++
Sbjct: 261 KDLRGQLAETRTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDVYTEGGVIKPGQALM 320

Query: 315 YIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFVDEA 374
            IVPQ  PL++ +RV    VD+V+ G  V L FSAF+Q  TP + G+V  VS D  VDE 
Sbjct: 321 DIVPQGEPLLVEARVPVQMVDKVHPGLPVELLFSAFNQATTPRVAGEVTLVSADRQVDER 380

Query: 375 TGASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAFRE 434
           T   +Y +        M++L+G+ + PGMPVE FI+T +R+ + Y  KPL D  + A  E
Sbjct: 381 TDEPYYTLRAQVSAAGMQQLDGVQIRPGMPVETFIKTGERSMLNYLFKPLLDRTHMALVE 440