Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 435 a.a., type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score =  442 bits (1138), Expect = e-129
 Identities = 229/430 (53%), Positives = 314/430 (73%), Gaps = 1/430 (0%)

Query: 6   AKKFPARRQLLIGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVV 65
           +K +P R   + G +A+ +LVGG G W+  A I+GA+IA G I+V+QNRQVVQHP GGVV
Sbjct: 5   SKSYPIRGLTIAGLLAMGLLVGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVV 64

Query: 66  QRIAVDEGDTVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDE 125
             + V EGD V    LL++L+P+ L  +  IVEGQL E +ARR+   AERD  EEV F E
Sbjct: 65  DEVLVSEGDLVEEDALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAE 124

Query: 126 ELLLVSATSPEVADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQ 185
            L  +S T  +  ++++GQ+RLFEAR  ++     +L  R  QI +QI+GIEAQQ+AL +
Sbjct: 125 LLFELSGTHVQTEELINGQKRLFEARLVNLRARISRLQERVGQIQSQIDGIEAQQSALQE 184

Query: 186 QLDLIEQELADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIE 245
           QL LI +EL +QQSLL +GLAQ+SRVLSLQREQ+RL G  G LTA KA+ EG+ TE+ +E
Sbjct: 185 QLVLIGKELENQQSLLSQGLAQSSRVLSLQREQSRLRGQAGALTAQKAQAEGQVTELGLE 244

Query: 246 ILKLSTSRREEAISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERS 305
           IL  +++RREEAI+ LRD Q +E EL ++R  + +RLSRLD+RAP+ G+VYDL+VFA +S
Sbjct: 245 ILNQTSARREEAITTLRDLQVRELELIERRNVILQRLSRLDVRAPMAGVVYDLNVFARKS 304

Query: 306 VIRPAEPVLYIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSV 365
           VIR A+P++Y++PQ +PL+I+++V P ++D+VY+ Q V+L FS+F+QR TP L G V +V
Sbjct: 305 VIRAADPLMYLIPQSQPLVISAQVAPSDIDQVYLNQPVSLNFSSFNQRTTPTLFGTVSTV 364

Query: 366 SPDAFVDEATGASFYRVETAPQEGEMEKL-EGLDLIPGMPVEAFIRTADRTPIEYFVKPL 424
           S D+FVD  TG S+Y VE    +GE+++L EG  L+PGMPVE FI+T  RTP  Y ++P 
Sbjct: 365 SADSFVDPQTGRSYYVVEARLNKGEIDRLPEGNVLVPGMPVETFIQTNSRTPFAYLLQPF 424

Query: 425 SDYFNRAFRE 434
           +DY NRAFRE
Sbjct: 425 TDYLNRAFRE 434