Pairwise Alignments

Query, 310 a.a., OmpA/MotB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 484 a.a., outer membrane protein and related peptidoglycan-associated (LipO)protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 84/292 (28%), Positives = 128/292 (43%), Gaps = 19/292 (6%)

Query: 17  HALELALPDGAMQAHDASVPAARYALPTGPAKAGTVPLRQVEGTLRHRVWHLSPPQTLAV 76
           H L   LP GA  A  + +  A+  + TG      +   Q EG L    + L    +   
Sbjct: 206 HPLMQRLP-GAFIAKYSQLGYAKSPVLTGVEGKKAITAIQ-EGKLTQIAYSLPRSYSEFE 263

Query: 77  LLASLRAQLEEAGYEVLLDCTARGCGGYD-FRFAVEDVGPPQMMVDLGRYGYLSARNSGT 135
           + A+  A L++ G++ +  C A+GC   D   +A++                +S  N  +
Sbjct: 264 VNANYVAALKKLGFQEVFSCEAKGCISKDAIYYALKPT--------------VSNGNDES 309

Query: 136 GHYAVILVSETRSLGYVQLTEITPAEIALDLDTTPDAQVPGAALARSGDIARPLADLLLS 195
             Y++  +S  R  G + ++  T        +     +  G    R G     L D +  
Sbjct: 310 LFYSLYRLS--RPEGDITVSSYTLGFSGALWNELKIIEATGLNDNRVGIDLNALTDAITQ 367

Query: 196 QGRVVLEDLRFATGNATLENGQYPSLTALAGFLTENPDLVIALVGHTDAEGSIDANLALS 255
            G+  L+ L F   +  +     P L  LA +L +NP L   +VGHTD +G    NL+LS
Sbjct: 368 TGKATLDGLLFDYDSDRMLPESKPVLEVLASYLKQNPALNFYVVGHTDDQGDKAYNLSLS 427

Query: 256 MRRAEAVRDRLVADYGVASERLRAEGVGYLAPRATNRTEEGRRANRRVEAVL 307
            RRA AV   L ADY +   +L A G+G  +P A+N  E G+  NRRVE VL
Sbjct: 428 ERRAAAVVKALGADYQIKPAQLEAHGMGEFSPVASNANEAGQSQNRRVELVL 479



 Score = 23.9 bits (50), Expect = 0.008
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 57  VEGTLRHRVWHLSPPQTLAVLLASLRAQLEEAGYEVLLDCTARGCG 102
           V G L    + L    T   ++ + +AQL + G  +L +C    CG
Sbjct: 67  VGGVLSRINYKLPASFTPEHIINNHKAQLVQQGANILFECHGNDCG 112