Pairwise Alignments

Query, 185 a.a., putative methyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 188 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Rhodopseudomonas palustris CGA009

 Score =  139 bits (349), Expect = 4e-38
 Identities = 88/186 (47%), Positives = 112/186 (60%), Gaps = 11/186 (5%)

Query: 1   MRIIAGRFGGRKLASLGKGDAAAHLRPTPDRVREALFSSLTSGAYGDPITGARVLDLFAG 60
           MR+I GR  GR L +    D    +RPT DR+RE++F+ L   AY +PI  ARVLDLFAG
Sbjct: 1   MRVIGGRLRGRNLVAPSSRD----IRPTADRLRESVFNILMH-AYENPILDARVLDLFAG 55

Query: 61  TGALGLEALSRGAAHVTFVETGRVAQRLLADNIRSLGVAAETRVRRSDACKLGPPE-VAP 119
           TGALG+EA SRGA  V FV+ G  A+ LL  N+ +LG+   ++V R DA  LGP   V P
Sbjct: 56  TGALGIEASSRGAKFVLFVDNGAEARALLRANVETLGLGGVSKVYRRDAANLGPAHPVEP 115

Query: 120 FALVFLDPPYGQGLGVRALAQ-RD--WIAPGALIVWEEG--APQDPLPGFDLRDQRRYGG 174
           F + FLDPPY + L   +LA  RD  W+ PGAL++ EE   A      G+   D+R Y  
Sbjct: 116 FGVAFLDPPYRKQLAEASLASLRDGGWLLPGALVIVEEAKDAGFAAPVGYTELDRRAYDD 175

Query: 175 THVTVL 180
           T  T L
Sbjct: 176 TEFTFL 181