Pairwise Alignments

Query, 379 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (577), Expect = 6e-64
 Identities = 141/375 (37%), Positives = 202/375 (53%), Gaps = 8/375 (2%)

Query: 2   TDPVALTADLIRCPSVTPEEGGALSLLEARLSAAGFACTRVDRNGIANLFARWGEKGHAR 61
           +D + LT +LI  PSVTP + G   L+  RL+A GF    +      NL+AR G +G   
Sbjct: 8   SDVIELTRELISRPSVTPLDEGCQDLMAKRLAAIGFTIEPMVFEDTTNLWARRGTEGPV- 66

Query: 62  SFGFNGHTDVVPVGARADWRFDPFGAQVEGDWMYGRGAVDMKSAVAAFAAAAMDFVADTP 121
            F F GHTDVVPVG    W   PF   V   +++GRGA DMK ++AA   AA  FVA+ P
Sbjct: 67  -FCFAGHTDVVPVGDLNRWHTPPFDPVVIDGYIHGRGAADMKGSLAAMVVAAERFVAEHP 125

Query: 122 P-DGAVILAITGDEEGDAKDGTVALLDWMAAQGEAMDVCLVGEPTCPDEMGEMMKIGRRG 180
              G++   IT DEEG   +GTV +++ + A+ E +   LVGEP+    +G+++K GRRG
Sbjct: 126 DHQGSIAFLITSDEEGPFINGTVRVVETLEARHEKITWALVGEPSSTHLLGDVVKNGRRG 185

Query: 181 SMTFFFEALGVQGHSAYPHRAKNPLPALAKLVDRLAGLELDTGTDHFDPSTLAVTTFDTG 240
           S+T      G+QGH AYPH A NP+   A  +  L+ +E D G + F P++  +   + G
Sbjct: 186 SLTGNLTVKGIQGHVAYPHLADNPIHRAAPALAELSRIEWDKGNEFFPPTSFQIANINGG 245

Query: 241 NPANNVIPAACRATVNIRFNDAHSSESLTAMVRGIAAEVAAETGIEITDRVSVSGESFIT 300
             A+NVIP   +   N R++   ++E+L A V GI      +  I+       +G  F+T
Sbjct: 246 TGASNVIPGELKVMFNFRYSTEVTAETLIARVLGILDAHGLDYDIDWV----FNGLPFLT 301

Query: 301 PPGRLSDLVAAAVETETGRVPVLSTSGGTSDARFV-QHHCPVVEFGLVGKSMHQVDERVA 359
             G L D    A+   TG      T+GGTSD RF+      V+E G V  ++H+V+E V 
Sbjct: 302 GEGPLLDATREAIFEVTGTHTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVK 361

Query: 360 IAQIPQLKAIYTRIL 374
            + +  L   Y RIL
Sbjct: 362 ASDLELLTGCYQRIL 376