Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Cupriavidus basilensis FW507-4G11

Subject, 300 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  214 bits (545), Expect = 2e-60
 Identities = 117/304 (38%), Positives = 171/304 (56%), Gaps = 8/304 (2%)

Query: 7   NAPALKAAQ--AVPGAPPTPVPGRLGSAFVLVGRLFREKPLGAAGAVICMIFLFCGVFAD 64
           NAP   A      P  PP     R  ++     R ++   L A G  I        + A 
Sbjct: 2   NAPHSNAGTETGTPFVPPPATTSRPSTS-----RFWQRNILFAIGFAIVGSMSLLALLAP 56

Query: 65  WLAPYGVNEISMMKRLQPPSWAHPFGTDNLGRDMLSRCLYGAQLSVIIGLSAATLATAIS 124
           W+APY    + +   L  PS  H  GTD LGRD+LSR LYGA++S+ +G  +  +A AI 
Sbjct: 57  WIAPYDPTALHLDTILSGPSATHLLGTDALGRDVLSRLLYGARVSLWVGFVSVGIAVAIG 116

Query: 125 VLIGILTGYLGGKFDLIVQRMVDAWMSFPDLVILIVVVSVLGPGSWQIIGTLGLLLGVGG 184
           + +G++ GY GG  D +  R+VD  + FP   +++ V++ L P    I+  +GL   +G 
Sbjct: 117 LAVGLVAGYFGGIIDELAMRLVDIMLCFPSFFLILAVIAFLEPSLGNIMAVIGLTSWMGV 176

Query: 185 SRIIRSAVVSVRENMYVHAAQSMGASTGRILWRHILPNVLPPIIVLFTTRVGTAILAESG 244
           +R++R+  +S+RE  +V AA+  GA   RI+  HILPN + P++V  T  V  AIL ES 
Sbjct: 177 ARLVRAETLSLREREFVAAARLAGAGRTRIILTHILPNAMAPVLVSATLGVAGAILTESA 236

Query: 245 LSFLGLGVPPPAPTWGGMLSGNGRTFMFQGPWLALAPGICLTVVVYAINVYGDALRDLLD 304
           LSFLGLGV PP P+WG ML   G+  +   PW++L PG+ + V V   N+ G++LRD LD
Sbjct: 237 LSFLGLGVQPPDPSWGNMLL-EGKDVLEIAPWMSLFPGLAILVTVLGYNLLGESLRDFLD 295

Query: 305 PRMR 308
           PR++
Sbjct: 296 PRLK 299