Pairwise Alignments

Query, 739 a.a., ligand-gated channel protein from Cupriavidus basilensis FW507-4G11

Subject, 704 a.a., TonB-denpendent receptor from Herbaspirillum seropedicae SmR1

 Score =  273 bits (699), Expect = 2e-77
 Identities = 215/730 (29%), Positives = 336/730 (46%), Gaps = 60/730 (8%)

Query: 24  LAATPAFAQSAADAGNAKEATLPTAVVTADSPLQAKRLPSYKFVAPLLDTPRSVTVIPEE 83
           LA  PA AQ    A  A E +   A    D  +    +   K  APL D P+++ V+P +
Sbjct: 21  LAILPACAQQDTTALPAIEVSGARA---NDGYVAPTAVSGTKSEAPLRDVPQTINVVPAQ 77

Query: 84  LLKQTNATTFADALKTVPGITFLGGDAAANPSADRPVIRGFESRNSIFVDGMRDSGVQNR 143
           +++  NA++  D LK VPG+    GD       D+  IRGF +    FVDG RD  +  R
Sbjct: 78  VIRDQNASSLQDVLKNVPGLGLSTGDG----QRDQVFIRGFTAIGDQFVDGFRDDALYFR 133

Query: 144 ETFAVEQISVIKGPDSVYAGRGAVGGSIDIVTKMPKADDFTNASLGLGTEAYKRATLDVN 203
           +   VE + VIKGP +V  GRG+ GG I+ VTK P  D  ++ S    + A +RA LD+ 
Sbjct: 134 DLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPGVD-VSDVSFTANSTAGRRAELDLG 192

Query: 204 RRLNDETAVRLNVMGH-DANQAGRNDVYSKRWGVAPSVAFGLNTPTTVSLSYYHVNTYDM 262
           R    E A+   + G  +   + R   +  R  +APSVA   +  T + L   ++    M
Sbjct: 193 RA--GEGALSWRLTGAVERGDSFRAQQFIDRTAIAPSVALRFSADTKLLLQMDYLEDRRM 250

Query: 263 PDFSVPFRSTGGTPGAGTSIQRSQFYGLNNR---DYRRGQTDTGEIRIEHRVDDNWKVRN 319
            DF +P  S  G P     +     YG  N    D+ + +  +      HR +D +  RN
Sbjct: 251 MDFGIP--SYRGRP---VDVDPGTTYGARNARDADFVQSRVASTTATFTHRFNDEFSFRN 305

Query: 320 TTMFGRSTLDYIATNPQFLNASANLLQLQAKSGKYATNSVSNQTELSGKATLLGMQHTLT 379
              +    L+   TN   +N +     L         N   NQ+EL+ K  L  ++H + 
Sbjct: 306 GLRYYDYHLNRNNTNGGTVNEATATTTLNHAKLVRDENGWFNQSELTQKLQLGSIRHEIL 365

Query: 380 AGVEFSWERSLYEGYLVSDSAGNNIRTGGPCTIAYNCTAIGAWNANAPWTGSTVLNADKS 439
            G+E                 G+  +     +   N   +  +N   P     V++ ++ 
Sbjct: 366 YGLEL----------------GSQSKDASQASGVVNFPGVSIFNPVLP-----VVDPNRL 404

Query: 440 FPGAPTSTRTNVSSAYLFDSVKLSDRWLFNAGTRFDRFD-----VTAVQAGTPDLKNTAN 494
            P   T    +  + YL DS+ LS++W    G R+DR+      +      T DL+ T  
Sbjct: 405 NPPTLTYGTYDTFATYLQDSLSLSEQWKALVGLRYDRYRQQSRILNLANGSTADLQRTDT 464

Query: 495 LFSYQLGLVFKPIDTVSLYASYGTSANPPGANSGLGGGTDQITKTNQDLSPERSRNIEVG 554
             S + GLV++P  T S Y S+  S  P G +  L          N DL+PE++RN E G
Sbjct: 465 AVSPRAGLVWQPSLTQSYYLSWSRSFQPSGESFALA-------TNNADLAPEQTRNTEAG 517

Query: 555 AKWDTLDRRLSLTSALFQTDKTNARVSDGLGGIVNAGKQRVRGAELGMAGNLTSKWRVFG 614
           AK+D  + R S T ++F+ ++ N + +   G ++  GKQR  GAEL  + +L   W++  
Sbjct: 518 AKYDFWEGRASATVSVFRLERDNIKSALPNGVVIPVGKQRTDGAELSFSADLKQGWKLLA 577

Query: 615 GYSYLDAITIDAGSANASA--SGLPMVMVPKHNVTLWTYYDVLPRLSIGGGATISSLTYA 672
           GY++L+A+  ++ S +      G    + P+H+  LW   ++   L +GGGA      +A
Sbjct: 578 GYAWLNAVITESSSFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGGGANAVGARFA 637

Query: 673 SVSATSRKWTPGYARFDAVATYRVSKTVDVQLNVQNLFDKKYYSAAY---PIYATWAPGR 729
           +   T     PGY   DA+A YR SK  +VQLN+ NLF+  Y  + +   P  +     R
Sbjct: 638 NPGNTVT--LPGYVTVDAMAAYRTSK-YEVQLNIGNLFNTGYIISGHGTNPNLSMPGAPR 694

Query: 730 SVVMTLNFHM 739
           +V +TL +HM
Sbjct: 695 NVALTLRYHM 704