Pairwise Alignments
Query, 502 a.a., sugar ABC transporter ATPase from Cupriavidus basilensis FW507-4G11
Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395
Score = 399 bits (1024), Expect = e-115
Identities = 228/494 (46%), Positives = 307/494 (62%), Gaps = 5/494 (1%)
Query: 4 ITEITPLFEMRGICKNFPGVKALDDVSFAIYPGEVHMLLGENGAGKSSLMKVLCGVYVAD 63
+TE +P+ + GI K FPGV+ALD VS I PGEVH L+GENGAGKS+LMKVL G++ D
Sbjct: 1 MTEQSPVLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPD 60
Query: 64 AGEFYHDGSPVAITSPADTMGLGIAVIFQEFSLVPYLDIAQNIFLGREPRGRIPGSVDAA 123
G+ PV ++ P D GI I QE SL L +A+NI+LG PR R G VD A
Sbjct: 61 EGQIIVAEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRF-GLVDWA 119
Query: 124 RMHAEARRILDILGMEVSTRTPVHRLGVAQQQMVEIAKALSQNARILVLDEPTAALSDRE 183
+ A+ IL+ L + + +T V L +A QQMVEIA+AL+ +A+ ++ DEPTA+L+D E
Sbjct: 120 ELEAKTNAILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAE 179
Query: 184 TEKLFAVIARLKADGVSMIYISHRMAEVFALGDRITILRDGRKVGACLPGDATPDELVAR 243
LF VI+ L+ GV + YISHRM E+F + DRI++LRDG+ G + + +
Sbjct: 180 KVVLFEVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQM 239
Query: 244 MVGRKVDMSYSRERSAQPGEVALDVRNVSADSGIADINLQVRAGEIVGLAGLVGSGRSEV 303
M+GRK+D+S E + GEVAL+VR +S S D+N +VR GE+VG GLVG+GR+E+
Sbjct: 240 MIGRKLDLS-RNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEI 298
Query: 304 ARAVFGADPIRQGEIYIFGKRLT-GGPDRARELGAALIPESRKSEGLALIRTVRDNLLLA 362
A +FG G I++ G + P A E G +L+PE RK +GL L RDN+ L
Sbjct: 299 AETLFGLRNPTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTLP 358
Query: 363 GLRRAFPARWYRADKAE-ALAEREIARLRIATPDGNQLAQFLSGGNQQKIVIGKWLVAEA 421
+ A + AD AE A+ ++ +L I TP QL LSGGNQQKIVIGKWL
Sbjct: 359 QV-DDLKAGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRP 417
Query: 422 KLFIFDEPTRGIDVGAKAEIFALIDSLVKQGAGVLLISSELPEIINVCDRTYVMRGGRIA 481
+ I DEPTRGIDVG+KAEI L+ L QG V++ISSE+PE+++V DR M GRI
Sbjct: 418 NVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIM 477
Query: 482 GEVAHAEMTEERIL 495
E+TEE ++
Sbjct: 478 RTFTSEEVTEENLI 491
Score = 88.6 bits (218), Expect = 5e-22
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 27 DDVSFAIYPGEVHMLLGENGAGKSSLMKVLCGVYVADAGEFYHDGSPVAITSPADTMGLG 86
+DV+F + GEV G GAG++ + + L G+ +G + DG+ VAITSP D + G
Sbjct: 273 EDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRNPTSGSIFLDGAEVAITSPHDAIERG 332
Query: 87 IAVIFQEFSLVPYLDIAQNIFLGREPRGRIP----GSVDAARMHAEARRI--LDILGMEV 140
I SLVP Q + LG R + + A A+ I D ++
Sbjct: 333 I-------SLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVADGAEIAIFDQYRDKL 385
Query: 141 STRTP-----VHRLGVAQQQMVEIAKALSQNARILVLDEPTAALSDRETEKLFAVIARLK 195
RTP V L QQ + I K LS +L++DEPT + ++ ++ L
Sbjct: 386 DIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLA 445
Query: 196 ADGVSMIYISHRMAEVFALGDRITILRDGRKVGACLPGDATPDELVARMVG 246
A G ++I IS M EV + DRI + GR + + T + L+A + G
Sbjct: 446 AQGYAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVTEENLIAAISG 496
Score = 87.4 bits (215), Expect = 1e-21
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 10/221 (4%)
Query: 280 INLQVRAGEIVGLAGLVGSGRSEVARAVFGADPIRQGEIYIFGKRLT-GGPDRARELGAA 338
++L + GE+ L G G+G+S + + + G +G+I + + + GP A+ G
Sbjct: 26 VSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIVAEQPVVMSGPLDAKAKGIV 85
Query: 339 LIPESRKSEGLALIRTVRDNLLLAGLRRAFPARWYRADKAEALAERE--IARLRIATPDG 396
I + LA +V +N+ L L R R+ D AE A+ + +L++
Sbjct: 86 FIHQELS---LADELSVAENIYLGELPRK---RFGLVDWAELEAKTNAILEKLKVGFNAK 139
Query: 397 NQLAQFLSGGNQQKIVIGKWLVAEAKLFIFDEPTRGIDVGAKAEIFALIDSLVKQGAGVL 456
++ LS NQQ + I + L +AK IFDEPT + K +F +I L +QG G+
Sbjct: 140 TRVGD-LSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFEVISDLQEQGVGIA 198
Query: 457 LISSELPEIINVCDRTYVMRGGRIAGEVAHAEMTEERILQL 497
IS + EI + DR V+R G+ G V AE EE + Q+
Sbjct: 199 YISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQM 239