Pairwise Alignments

Query, 889 a.a., RND transporter from Cupriavidus basilensis FW507-4G11

Subject, 841 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 95.1 bits (235), Expect = 2e-23
 Identities = 152/621 (24%), Positives = 245/621 (39%), Gaps = 95/621 (15%)

Query: 282 GALTVLVVILILWLALRSKRLILAVLASLAVGLAITAALGLAMVGALNMISVAFAVLFVG 341
           G  +++ VIL++WLA RS   +     ++A  L    +  L +   ++++++ F    +G
Sbjct: 281 GLASLIGVILLVWLAFRSMMPLTIAALTIATSLLFALSATLWIFTQVHLLTLVFGTSLIG 340

Query: 342 LGVDFGIQFGV-RYRAERHVH---TDIPDALASTARAVGVPLA-LAAASTAAAFFCFLPT 396
           + +D+   F   R ++++ V    T      A+ A A   P A LA  +T  A+     T
Sbjct: 341 IAIDYSFHFYCERLQSQKAVSGTATQTTGITATDAVARVFPAASLALLTTVIAYLAIGLT 400

Query: 397 NYRGVAELGQIAGVGMLVAFLTTITLLPALI-TVFRPKDEAGRVEVPGFKWLAPADDFFE 455
            + G+ ++      G+L A+LT I   P L  +  RP D A  +     ++L        
Sbjct: 401 PFPGMQQVAVFCAAGLLGAYLTLIFAYPKLANSTMRPGDRALGLAT---RYLNAMQTIAR 457

Query: 456 --RNRKAVLLATGALILAGSPLLMHLRFDFDPLHLKDPHSESMATLLSLKDAPQ------ 507
                K + +A G L++A         F  + L + D       + LS+    Q      
Sbjct: 458 PINGAKGIAIALGLLLVA--------IFGLNRLGVNDDIRALQQSPLSVTQGEQRLRQVM 509

Query: 508 -AGTDNVSVLAPSLAAAQTAAARLVALPEVSRTV-TLQTFIPDDQPARLALIAAASASLM 565
             GTDN  +L      A+TA A L  L  +S T+ +LQ          LA    + AS  
Sbjct: 510 SGGTDNQFILV----RAETAEALLTRLEALSPTLGSLQHQGVLGNSVNLAHYLPSQASQQ 565

Query: 566 PVLTQATATPANDARLVNSLKNAARQLALAADEHPGPGAAEAARLAASLQKLAAADAATR 625
                         ++ + L      L L  D            LA SL  +A+ +A+  
Sbjct: 566 EAYRL-------QGQIYHKLPEVLAHLGLDGD------------LAPSL--MASFEASAN 604

Query: 626 ERAEQAIAQPLRLALARLQRALAPQPITRETLPPALVRDWVAPDG---QALVSVSPKLPV 682
           E        P +   +R     AP               W+APDG   QA +    +   
Sbjct: 605 ETIT-----PDKFFASRAGELFAPL--------------WLAPDGTDAQAQMQAQTQAQA 645

Query: 683 AATPGDASSTSDSDARDA-----ALTRFIDAVQRVEPTAVGGPISIRGSADTIMTAFAQA 737
              P D +S SD     A      +T   D  Q + P +    +        +M  +   
Sbjct: 646 KTQPSDKTSGSDGATYGAIVLLGGITDLDDLTQAISPLSGVTLVDKVQDISDVMAKYRSL 705

Query: 738 GVWAVLSITLLL--WITLRRVGDVLR---TLVPLLVSALVTLELCVVFGIPLNFANVIAL 792
            + ++L + L++   I   R G  +    T VP L +AL+TL    + G PL   + +AL
Sbjct: 706 TL-SLLGLALVVAGLIFSLRFGLKMALWITAVPAL-AALLTLAGLGLAGSPLTLFHALAL 763

Query: 793 PLLFGIGVAFKIYYVIAWR-EGKTQLLQSPLTHAVLFSAATTAAAFGSLWLSQHPGTASM 851
            L+FGIGV + +++  + R EG        +  AV  SA +T  AFG L  SQ P     
Sbjct: 764 ILVFGIGVDYSLFFAESHRGEG--------VMMAVFMSACSTLMAFGLLAFSQTPAIHYF 815

Query: 852 GKLLALALGCTLVGAVFFQPI 872
           G  L L +G T V + F   +
Sbjct: 816 GLTLLLGIGLTFVLSPFIHTL 836



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)

Query: 288 VVILILWLALRSKRLILAVLASLAVGLAITAA---------LGLAMVGA-LNMISVAFAV 337
           + + +L LAL    LI ++   L + L ITA           GL + G+ L +      +
Sbjct: 705 LTLSLLGLALVVAGLIFSLRFGLKMALWITAVPALAALLTLAGLGLAGSPLTLFHALALI 764

Query: 338 LFVGLGVDFGIQFGVRYRAERHVHTDIPDALASTARAVGVPLALAAASTAAAFFCFLPTN 397
           L  G+GVD+ + F   +R E  V   +  +  ST  A G+   LA + T A        +
Sbjct: 765 LVFGIGVDYSLFFAESHRGE-GVMMAVFMSACSTLMAFGL---LAFSQTPA-------IH 813

Query: 398 YRGVAELGQIAGVGMLVAFLTTIT 421
           Y G+  L  I    +L  F+ T+T
Sbjct: 814 YFGLTLLLGIGLTFVLSPFIHTLT 837