Pairwise Alignments

Query, 405 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

Subject, 387 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  312 bits (800), Expect = 9e-90
 Identities = 174/384 (45%), Positives = 235/384 (61%), Gaps = 11/384 (2%)

Query: 15  VLALGAAQIVGWGSSTYLPAVIAAPASKDLGLSPGMFFGAFSLALVTMACAGPAIGRYID 74
           VLALG+AQ + WGS+ YLPA++A P + +LG+S G  F AFSLAL+  A  GP  G+ ID
Sbjct: 8   VLALGSAQTLAWGSTYYLPAILAEPMASELGISTGNVFAAFSLALIVTAVLGPLSGKRID 67

Query: 75  RNGGRRVLLSSNFVLAAGLLLLSQASGGIALYAAWCVMGLGMAMGLYDAIFAALVAQHAK 134
            +GGR VL  S+ + A GL +L  ASG + L+  W V+G+GMA+GLY++ F+ L     +
Sbjct: 68  HHGGRDVLALSSIIFAVGLAVLGMASGPLMLWLGWLVIGIGMALGLYESAFSTLTGIFGR 127

Query: 135 AASRLIVGVSLVGGFASTVGWPASTWVIEHWGWRSCCQAWAVAHLLIAAPVYWRLVPPGR 194
            A   I G++L+ GFAST+ WP S W+   +GWR+ C  WA  HLL+  P+   L+P G 
Sbjct: 128 DARGAITGITLLAGFASTICWPISGWLNAEYGWRATCLTWAGVHLLLGLPLNRLLIPVG- 186

Query: 195 AEPSIKPAAHPSASANAAMPPGSRARELGLLCIFSGATAFVTSAMAVHLPALLLAKGATF 254
               ++ A  P+  + A   PGS    + LL     AT F ++AMA HLP LL   G + 
Sbjct: 187 ----VQRAMSPAERSQANGRPGS-GLTMALLAFVFAATWFTSTAMAAHLPRLLQESGLSA 241

Query: 255 GQAVFAGVLLGPAQVVARLVEFGLTQRLKIHPLTTARLATALHPVACVSLGLFGMASGSG 314
             A+    L+GPAQV AR +EF L QR   HPL +ARLA   HPV    + L G  + + 
Sbjct: 242 AAAIGVAALVGPAQVGARCLEFVLLQR--FHPLISARLAAIAHPVGAAGVLLAGAPATTA 299

Query: 315 PLFSVLHGAGNGMISVARGVLPLALFGASGYGAVTGRLAVFGRTAQAFAPIAFALVLTQY 374
             F +LHG GNG++++A+G LPLALFG  GYG   G L V  R AQAFAP  FAL++  +
Sbjct: 300 --FVLLHGGGNGILTIAKGTLPLALFGPHGYGLRQGLLMVPARFAQAFAPFVFALLIDDF 357

Query: 375 GPGAALCLSGALSMVALLALLRLR 398
           G G AL LS AL ++A +AL  L+
Sbjct: 358 GTG-ALWLSAALGVLAYVALSLLQ 380