Pairwise Alignments

Query, 1049 a.a., cytochrome C peroxidase from Cupriavidus basilensis FW507-4G11

Subject, 1075 a.a., heavy metal efflux pump, CzcA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  675 bits (1742), Expect = 0.0
 Identities = 413/1070 (38%), Positives = 624/1070 (58%), Gaps = 60/1070 (5%)

Query: 1    MLAGLIEFSLRQRALVLIAACVLAVAGAWAYLKLPIDAFPDISPTQVKVILKIPGMTPEE 60
            ML   IE +++ R LV++A      A      KL +DAFPD++  QV +  +  G+  EE
Sbjct: 1    MLQKAIEAAIKNRLLVVLALLAAVAASVAMLPKLNLDAFPDVTNVQVTINTEAEGLAAEE 60

Query: 61   VEQRVSTPIEQELLGIPHKTIVRSVSKYGISDVTVDFEEGVDSYWARQQVSERLAGLLRD 120
            VE+ +S P+E  +  +P  T VRS+S+ G+S VTV F EG D Y+ARQQV E+L    R+
Sbjct: 61   VEKLISYPVESAMYALPAVTEVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAA-RE 119

Query: 121  LPPNAIG--GLAPITTPLGEMFMFTVEGD---AFSLAERRRVLDWVLRPALRTVPGVADV 175
            + P+ +G   + P T+ LG+++ + +  D     + AE R + D++++  L  V GV DV
Sbjct: 120  MIPSGVGVPEIGPNTSGLGQIYQYILRADPSAGINAAELRSLNDYLVKLILMPVGGVTDV 179

Query: 176  NALGGEVRSYEVIPDPARLRARAVTVEQLRQALDANNRNDGAGRVEQGDENWVVRVEG-- 233
             + GGEVR Y+V  DP +LRA  +++ Q+ +AL++NNRN G   ++QG E  VVR  G  
Sbjct: 180  LSFGGEVRQYQVQVDPNKLRAYGLSMAQVSEALESNNRNAGGWFMDQGQEQLVVRGYGML 239

Query: 234  --GVRGVEDLRQVAVAAPGGRNGMPLVTVGDVATVRLGVATRNGAVSKDGR--------- 282
              G  G+  + Q+ +    G      V VGD+A V  G   R GAV+   R         
Sbjct: 240  PAGEAGLASIAQIPLTEVRGTP----VRVGDIAKVDFGSEIRVGAVTMTRRDEAGQAQAL 295

Query: 283  GEAVQGLVLALRGADARQLVADVQARLDALAPQLPKGMSTHVFYNRGELVTRAANTVVRA 342
            GE V G+VL   GA+ +  + D+ AR++ +   LPKG+S  VFY++ +LV +A  TV  A
Sbjct: 296  GEVVAGVVLKRMGANTKATIDDIDARINLIEQALPKGVSFEVFYDQADLVDKAVATVRDA 355

Query: 343  LIEASLLVVVTLYLFLGGLRAALVVAATLPLSMLATFMLMRYVGLTANLMSLGGLAIALG 402
            L+ A + +VV L LFL  +RA L+V  ++P+S+    M+M Y GL+ANLMSLGGLA+A+G
Sbjct: 356  LLMAFVFIVVILALFLVNIRATLLVLLSIPVSIGLALMVMSYYGLSANLMSLGGLAVAIG 415

Query: 403  MLVDAAVVVVENIESALAKAHER-----------KSDP---SLRGAV------------- 435
            MLVD +VV+VENI   L +   R           ++DP      G V             
Sbjct: 416  MLVDGSVVMVENIFKHLTQPDRRHLTQARARADGEADPYHGDEDGGVNADDDDHQGNMAV 475

Query: 436  -IRHAVASVAVPMLAGVSIIAIVFLPLLSLQGLEGKLFGPVALTIVLALASSVAIAFTVV 494
             I  A   V  P+    +II +VF PL +L+G+EGKLF P+A++I+LA+ S++ +A   V
Sbjct: 476  RIMLAAKEVCSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAVSIILAMISALLVALIAV 535

Query: 495  PALASLLLRTHAD-ESPYLMRKVARGFARLQDWSARHPRAVFASAGVALAVAVALYLSVG 553
            PALA  L +     +   ++R +   + +L   +   P+ V  SA +   +++AL   +G
Sbjct: 536  PALAVYLFKRGVVLKESVILRPLDNAYRKLLSATLARPKMVVLSAVIMFVMSMALLPRLG 595

Query: 554  KTFMPTMDEGDMIVQLQKAPSVSLATSVGLDLRVQQALLAEVPEIRSIVARSGSDDLGLD 613
              F+P ++EG + +++  AP+ SL TS+ +  +++ ALL + PE+   ++R G+ +LG D
Sbjct: 596  TEFVPELEEGTINLRVTLAPTASLGTSLDVAPKLE-ALLLQFPEVEYALSRIGAPELGGD 654

Query: 614  PMGLNETDTFLALRPKDQWRGSKEDIASAIRRVMER----FPGVVYGFTQPIEMRVSEML 669
            P  ++  + ++ L+P ++W+ +   +A  ++R+ME     FPG++  F+QPI  RV E+L
Sbjct: 655  PEPVSNIEIYIGLKPIEEWQSASSRLA--LQRLMEEKLSVFPGLLLTFSQPIATRVDELL 712

Query: 670  TGTRGDVAIKVFGSDLGAIDTAAQAIAARVRKIPGAAEVIAPSNEGVQYLTLALDRAAVG 729
            +G +  +AIK+FG DL  +    Q +   V KIPGA +V      G   L +  DR+ + 
Sbjct: 713  SGVKAQLAIKLFGPDLAVLSDKGQVLTDLVAKIPGAVDVSLEQVSGEAQLVVRPDRSQLA 772

Query: 730  RAGLSGDALQALLRAQVEGERIGIVPEGTVRTPLILRGSDSLRQTPETFTSLQVTAPDGT 789
            R G+S D +  L+   + G   G V +G  R  + LR +   R +P+    L ++  +G 
Sbjct: 773  RYGISVDQVMTLVSQGIGGASAGQVIDGNARYDINLRLAAEFRSSPDVIKDLLLSGTNGA 832

Query: 790  SWPLTSLAQVRRVEGPVRINHEDGGRFAVIQVSVEGRDLTGFVQEAQTSVAGLAGLPKGL 849
               L  +A V     P  I  +D  R  V+Q +V GRD+   V +    V   A LP G 
Sbjct: 833  IVRLGEVASVEVEMAPPNIRRDDVQRRVVVQANVAGRDMGSIVNDIYALVPK-ADLPAGY 891

Query: 850  RVAWGGQFENQQRAAARLALVVPLALGAIFLLLMLTFRSIRQAALVIANIPFALVGGIAA 909
             V  GGQ+ENQQRA  +L LVVP+++  I LLL  +F +++Q  L++AN+P AL+GGI A
Sbjct: 892  TVIVGGQYENQQRAQQKLMLVVPVSIALIALLLYFSFGAVKQVLLIMANVPLALIGGIVA 951

Query: 910  LRVAGEYLSVPASVGFIALLGIAVLNGVVLVSHFNTLLEEGLPMAEAVRTGVRDRLRPVL 969
            L V+G YLSVP+S+GFI L G+AVLNGVVLV   N   + G  + ++V  G   RLRPVL
Sbjct: 952  LFVSGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQRRQSGESLYDSVYEGTVGRLRPVL 1011

Query: 970  MTACITALGMIPLLLASGPGSEIQRPLAIVVSGGLVSSTALTLLLLPLLF 1019
            MTA  +ALG+IP+L++SG GSEIQ+PLA+V+ GGL SSTALTLL+LP L+
Sbjct: 1012 MTALTSALGLIPILVSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLY 1061



 Score = 80.9 bits (198), Expect = 5e-19
 Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 25/349 (7%)

Query: 161  VLRPALRTVPGVADVNA--LGGEVRSYEVIPDPARLRARAVTVEQLRQALDANNRNDGAG 218
            VL   +  +PG  DV+   + GE +   V PD ++L    ++V+Q+   +        AG
Sbjct: 737  VLTDLVAKIPGAVDVSLEQVSGEAQLV-VRPDRSQLARYGISVDQVMTLVSQGIGGASAG 795

Query: 219  RVEQGDENWVV--RVEGGVRGVEDLRQVAVAAPGGRNGMPLVTVGDVATVRLGVATRNGA 276
            +V  G+  + +  R+    R   D+ +  + +  G NG  +V +G+VA+V + +A  N  
Sbjct: 796  QVIDGNARYDINLRLAAEFRSSPDVIKDLLLS--GTNGA-IVRLGEVASVEVEMAPPNIR 852

Query: 277  VSKDGRGEAVQGLVLALRGADARQLVADVQARLDALAPQ--LPKGMSTHVFYNRGELVTR 334
                 R   VQ  V    G D   +V D+ A    L P+  LP G  T +   + E   R
Sbjct: 853  RDDVQRRVVVQANVA---GRDMGSIVNDIYA----LVPKADLPAGY-TVIVGGQYENQQR 904

Query: 335  AANTVVRALIEASLLVVVTLYLFLGGLRAALVVAATLPLSMLATFMLMRYVGLTANLMSL 394
            A   ++  +  +  L+ + LY   G ++  L++ A +PL+++   + +   G   ++ S 
Sbjct: 905  AQQKLMLVVPVSIALIALLLYFSFGAVKQVLLIMANVPLALIGGIVALFVSGTYLSVPSS 964

Query: 395  GGLAIALGMLVDAAVVVVENIESALAKAHERKSDPSLRGAVIRHAVASVAVPMLAGVSII 454
             G     G+ V   VV+V++I         R+S  SL  +V    V  +  P+L      
Sbjct: 965  IGFITLFGVAVLNGVVLVDSINQ------RRQSGESLYDSVYEGTVGRLR-PVLMTALTS 1017

Query: 455  AIVFLPLLSLQGLEGKLFGPVALTIVLALASSVAIAFTVVPALASLLLR 503
            A+  +P+L   G+  ++  P+A+ I+  L SS A+   V+P L   L R
Sbjct: 1018 ALGLIPILVSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLYRWLYR 1066