Pairwise Alignments

Query, 450 a.a., 16S rRNA methyltransferase from Cupriavidus basilensis FW507-4G11

Subject, 431 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Dyella japonica UNC79MFTsu3.2

 Score =  267 bits (682), Expect = 6e-76
 Identities = 184/450 (40%), Positives = 240/450 (53%), Gaps = 33/450 (7%)

Query: 7   SLAFQMLAAAAAVRGVNEGSALPLAIENAAAQY--RLDRVRDAATRGALQDLAYRTMRQF 64
           +LA Q LA  A +RG ++         +A  +Y  RL   RD A   AL     R   +F
Sbjct: 6   ALAAQALAEVA-LRGASQ--------RDATERYAPRLADPRDRALFTALVSDGARWWLRF 56

Query: 65  GTARALVTKLVTRPPGALVDSLLAVALALLVEDEQGEGGYTEFTVVDQAVSAAASEPKTA 124
             A   +     R     V +LL + L  L   E  +      TV     + A   P+ A
Sbjct: 57  DAALDRLLDKPLRQKEPAVHALLVLGLVQLEILELPDYAAVAATV---QAARALERPRLA 113

Query: 125 HARGLVNAVLRRFLRERKALLAEVRQDDEARWNLPAWWLDALRKAYPDQWTALAESANVR 184
              GLVNA+LRR+ RER  LLA +    + R   PAW   A+   +P Q  A+  + NV 
Sbjct: 114 ---GLVNAILRRWQRERVELLAALDAKPQTRHAHPAWLAKAIASDWPAQADAVMAADNVE 170

Query: 185 PPMTLRVNTARVSVPDYLKRVLNAGMAGVAIG--PQAVRLVRAFPVSQIPGFAEGDVSVQ 242
           PP+ LR N  R +  + L+R+  AG    A      A+ L  +  V+++PGFAEG  +VQ
Sbjct: 171 PPLMLRANRRRTTRENLLERLREAGYTVDAHAWLADAIVLPHSTDVTRMPGFAEGHFAVQ 230

Query: 243 DAGAQLAAALLDLADGQRVLDACAAPGGKTGHILELANVEVTALESDAQRATRIDENLAR 302
           D  AQ+A  L +  DG RVLDACAAPGGK  H+LE A+V +TALESDA RA RI +NL R
Sbjct: 231 DGAAQIATDLAEARDGLRVLDACAAPGGKACHLLERADVALTALESDAGRARRISQNLER 290

Query: 303 LGQQATVVVGNASRPQDWWDNRQYDRILADVPCSASGIVRRHPDIRWLRREVDIPRLVTE 362
           LG  A +V+G+A +P  WWD R +DRIL D PCSA+G++RR PD+R  RR+ DI  L  +
Sbjct: 291 LGLSAELVIGDAGQPDAWWDGRPFDRILIDAPCSATGVLRRRPDVRLHRRDSDIAALAAQ 350

Query: 363 QRRIVSQLWNLLKPGGILVYVTCSIFPTENEEQARWFGAQLPDA----IRLQAPGQMLPG 418
           QRRI+  LW LL PGG L+YVTCS+   ENE     F A  P+A    I L A GQ    
Sbjct: 351 QRRILEALWPLLAPGGRLLYVTCSLLRAENEAVVGEFLASRPEARVAPIALPA-GQAAAA 409

Query: 419 SMDQLAGGGNGSQEGLPTDHDGFFYARFQK 448
               L G G         D DG +YA  ++
Sbjct: 410 GWQILPGDG---------DLDGMYYAVLER 430