Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

 Score =  585 bits (1507), Expect = e-171
 Identities = 334/698 (47%), Positives = 439/698 (62%), Gaps = 45/698 (6%)

Query: 5   LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAKE 64
           LNP Q EAV+Y+ GPCLVLAGAGSGKTRVIT KIA+L++  G++ ++IAAVTFTNKAA+E
Sbjct: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62

Query: 65  MQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDCF 124
           M+ER+A+ + GK    G       + VSTFH+LG+ I+R E + +GLK  FS+ D  D  
Sbjct: 63  MKERVAQTL-GKGESRG-------LMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQL 114

Query: 125 GMVQE---QLASTDKKLIRSVQSTISLWKNGMVDPETAIARADNPDDHQAALIYRNYVAT 181
            +++E   +    DK L+R + STIS WKN M+ P  A A A        A  +  Y   
Sbjct: 115 ALLKELTEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQ 174

Query: 182 LHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLAGGS 241
           + +Y A+DFDDLI LP  L   NEEVR RWQNR+RY LVDEYQDTN  QY+L+K L G  
Sbjct: 175 MQSYNALDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVG-- 232

Query: 242 HLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAANAV 301
                  T VGDDDQ+IY WRGA   NL LL  DFP LK++KLEQNYRST RIL AAN +
Sbjct: 233 --ERGRLTVVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANIL 290

Query: 302 ISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQFRDYAILYR 361
           I+NNP ++ K L+SE   G+ + V   N+E+HEAE V+  + AHKF  R ++RDYAILYR
Sbjct: 291 IANNPHVYQKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYR 350

Query: 362 GNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRAITTPK 421
           GNHQ+RL E+ L + R+PY LSGG SFF +AEIKDI AYLR++ NPDDD AF+R + TPK
Sbjct: 351 GNHQSRLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPK 410

Query: 422 RGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLAGRAASD 481
           R +G  TLE LG++A     SLF A+   G+E  L  R LE LR F E +V +A  A   
Sbjct: 411 REIGPATLEKLGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERG 470

Query: 482 PATQVLDDMMEGIHYEAYLYDT-FDERQAQSRWTNTLEFLDWLKRKGTKPEATGEGEEAT 540
              + +  ++  I YE +LY+T    + A+ R  N  +   W+        A  EG    
Sbjct: 471 NTVEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWI-------VADLEG---- 519

Query: 541 GFDTADGFGDEGKNLLELTQTVALMSMLEGREE--DPDAVRLSTLHASKGLEYPHVFLVG 598
                D    + K L E+ Q + L  M+E  EE  D DAV+L TLHASKGLE+P+V+L+G
Sbjct: 520 -----DNPDQQEKTLKEVVQRLTLRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIG 574

Query: 599 VEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRKRARDTYSCEPSRF 658
            EEGILPH      + +E +EEERRLMYVGITRAQR L    CK+R++  +      SRF
Sbjct: 575 AEEGILPH---QTSIDEENVEEERRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRF 631

Query: 659 IGEM-------KLEEAPAIKDETPAMSPKDRLAGLKAL 689
           + E+       ++++ P  ++E  A   +  +A L+A+
Sbjct: 632 LDELPQDDIEWEVKKKPVTQEERMAKG-QAHIANLRAM 668