Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 787 a.a., DNA helicase II UvrD from Phaeobacter inhibens DSM 17395

 Score =  365 bits (937), Expect = e-105
 Identities = 248/676 (36%), Positives = 355/676 (52%), Gaps = 48/676 (7%)

Query: 4   GLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAK 63
           GLNPAQ  AV  L+GP L+LAGAG+GKT+ +T +I HL+     +P  I AVTFTNKAA+
Sbjct: 30  GLNPAQRAAVECLEGPVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVTFTNKAAR 89

Query: 64  EMQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDC 123
           EM+ER+A ++ G+   EG         + TFHS+ V++LR  AE VGLK  F+I+D+DD 
Sbjct: 90  EMKERVAGML-GQAV-EGMP------WLGTFHSICVKLLRRHAELVGLKSNFTILDADDQ 141

Query: 124 FGMVQEQLAST---DKKL-IRSVQSTISLWKNGMVDPETAIARADNPDDHQAALIYRNYV 179
             ++++ + +    DK+   R +   I  WKN  + P        +  +H+    Y  Y 
Sbjct: 142 IRLLKQLIKAEGIDDKRWPARMLAGVIDDWKNRALTPSKVPVSDASAYNHRGVDFYAQYQ 201

Query: 180 ATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLAG 239
           A L    AVDF DL+     +F  N +V  ++Q   R+ +VDEYQDTN  QY  L+ LAG
Sbjct: 202 ARLKDLNAVDFGDLLLHMVTIFQDNPDVLEQYQRWFRFIMVDEYQDTNVAQYLWLRLLAG 261

Query: 240 GSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAAN 299
                      VGDDDQ+IYGWRGA + N+   + DFP   VV+LEQNYRST  IL AA+
Sbjct: 262 AHK----NICCVGDDDQSIYGWRGAEVGNILRFEKDFPGANVVRLEQNYRSTEHILSAAS 317

Query: 300 AVISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERR----AQFRD 355
            VI  N     K+LW+E   G+ + +    D E EA  +   + A +   R        +
Sbjct: 318 GVIRGNSGRLGKELWTEARGGEKVRLIGHWDGEEEARWIGEEIEAMQRGTRGLAPVDLNN 377

Query: 356 YAILYRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIR 415
            AIL R +HQ R FE       +PY + GG  F+++ EI+D  AY R + +PDDD AF R
Sbjct: 378 MAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRQVISPDDDLAFER 437

Query: 416 AITTPKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLA 475
            + TPKRG+G+   + + T A    VSL E A +    G+++ +  + L      + R  
Sbjct: 438 IVNTPKRGLGDKAQQTIQTMARSNGVSLVEGARLAVESGQIKGKGGKALHQLVTDLARW- 496

Query: 476 GRAASDPATQVLDDMMEGIHYEAYLYDTFDERQAQSRWTNTLEFLDWLKRKGTKPEATGE 535
           GR A D  T  + ++ E I          DE    + W           +    P++ G 
Sbjct: 497 GRLAGDADTTHM-ELAEII---------LDESGYTTMW-----------QADKNPDSPGR 535

Query: 536 GEEATGFDTA-DGFGDEGKNLLELTQTVALMSMLEGREEDPDAVRLSTLHASKGLEYPHV 594
            E       A + F    +NL    + V+L+ M   +++    V + TLHA+KGLE+P V
Sbjct: 536 LENLKELVKALEAF----ENLQGFLEHVSLI-MDNDKQDAAQKVSIMTLHAAKGLEFPAV 590

Query: 595 FLVGVEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRKRARDTYSCE 654
           FL G E+G+ P  R  ++   + +EEERRL YVGITRA+    +S+   R+      S  
Sbjct: 591 FLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEICTISFAGNRRVFGQWQSQL 650

Query: 655 PSRFIGEMKLEEAPAI 670
           PSRFI E+  E    +
Sbjct: 651 PSRFIDELPEENVEVL 666