Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 726 a.a., DNA-dependent helicase II (RefSeq) from Shewanella loihica PV-4

 Score =  362 bits (928), Expect = e-104
 Identities = 247/682 (36%), Positives = 367/682 (53%), Gaps = 43/682 (6%)

Query: 4   GLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAK 63
           GLN  Q EAV       LVLAGAGSGKTRV+T +IA L++ +   P  I AVTFTNKAA 
Sbjct: 9   GLNDKQREAVGAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAAA 68

Query: 64  EMQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDC 123
           EM+ER+ K+      R         + + TFH L  ++LR   +   L   F I+DSDD 
Sbjct: 69  EMRERVEKVSGSNMGR---------MWIGTFHGLAHRLLRTHYQDANLPQSFQILDSDDQ 119

Query: 124 FGMVQEQLAST--DKKLI--RSVQSTISLWKNGMVDPETAIARADNPDDHQAALIYRNYV 179
             +++  L S   D+K    R  Q  I+  K+  + P+  I     P +     IY+ Y 
Sbjct: 120 LRLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKH-IDAGGFPIEQNLLKIYQVYQ 178

Query: 180 ATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLAG 239
            +      VDF +++    EL+     +   +Q R +  LVDE+QDTNA QY  ++ LAG
Sbjct: 179 ESCDRAGLVDFAEILLRAHELWLNKPHILEHYQERFKNILVDEFQDTNAIQYAWIRVLAG 238

Query: 240 GSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAAN 299
            +         VGDDDQ+IYGWRGA ++NL     DFP  + ++LEQNYRS+  IL A+N
Sbjct: 239 ST----ANVMIVGDDDQSIYGWRGAQVENLHRFLQDFPAAQTIRLEQNYRSSGNILNASN 294

Query: 300 AVISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQFRDYAIL 359
            +I+NNP    KKLW+E   G+ I +    +E  EA  +V R++  + +      D AIL
Sbjct: 295 ELIANNPDRLGKKLWTEDKDGEKIGLYCAFNEMDEARFIVGRITDWQ-DMGGNLSDCAIL 353

Query: 360 YRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRAITT 419
           YR N Q+R+ E+ L  + + Y + GG  FF++ EIKD   YLRLI+N +DD AF R I T
Sbjct: 354 YRSNAQSRVLEEALLHKGMAYRIYGGLRFFERQEIKDAMGYLRLISNKNDDAAFERIINT 413

Query: 420 PKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLAGRAA 479
           P RG+G+ TL++L + A Q +++L++  +    E  L  R    +R F + +V L    A
Sbjct: 414 PTRGIGDRTLDILRSTARQQELTLWQTCLRLLDEKVLSGRAANAVRSFMDLIVTLQQETA 473

Query: 480 SDPATQVLDDMMEGIHYEAYLYDTFDERQAQSRWTNTLEFLDWLKRKGTKPEATGEGEEA 539
                ++ D +++    +A +Y+     +A++R  N LE L    R    PE   +  E 
Sbjct: 474 EQSLHRMTDHVIQASGLKA-MYEAEKGEKARARVEN-LEELVTAARTFVMPEDLEDMGEL 531

Query: 540 TGFDTADGFGDEGKNLLELTQTVALMSMLEGREED-PDAVRLSTLHASKGLEYPHVFLVG 598
             F                  + A +   EG+ +   DAV+L TLH++KGLE+P VF+ G
Sbjct: 532 NAF-----------------LSHAALEAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAG 574

Query: 599 VEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRK-RARDTYSCEPSR 657
           VEEGI P     ++   ++++EERRL YVG+TRA + L++++ + R+   R+ Y+  PSR
Sbjct: 575 VEEGIFPSQMAMDE--GDRLDEERRLCYVGMTRAMKQLYITYAESRRIYGRENYA-RPSR 631

Query: 658 FIGEMKLEEAPAIKDETPAMSP 679
           FI E+  +    I+  T   +P
Sbjct: 632 FIKEIPGDYVQEIRMRTSVSAP 653