Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 722 a.a., DNA helicase II (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  365 bits (936), Expect = e-105
 Identities = 245/682 (35%), Positives = 371/682 (54%), Gaps = 43/682 (6%)

Query: 4   GLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAK 63
           GLN  Q EAV       LVLAGAGSGKTRV+T +IA L++ +   P  I AVTFTNKAA 
Sbjct: 9   GLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAAA 68

Query: 64  EMQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDC 123
           EM+ER+ K+      R         + + TFH L  ++LR   +  GL   F I+DSDD 
Sbjct: 69  EMRERVEKVAGTNMGR---------MWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQ 119

Query: 124 FGMVQEQLAST--DKKLI--RSVQSTISLWKNGMVDPETAIARADNPDDHQAALIYRNYV 179
             +++  L S   D+K    R  Q  I+  K+  + P+  I     P +     IY+ Y 
Sbjct: 120 LRLLKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKH-IDAGGFPIEQNLLKIYQVYQ 178

Query: 180 ATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLAG 239
            +      VDF +++    EL+     +   +Q R ++ LVDE+QDTNA QY  ++ LAG
Sbjct: 179 ESCDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRMLAG 238

Query: 240 GSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAAN 299
               +      VGDDDQ+IYGWRGA ++NL     DFP    ++LEQNYRS   IL+A+N
Sbjct: 239 ----QTANVMIVGDDDQSIYGWRGAQVENLHRFLKDFPTATTIRLEQNYRSKGNILKASN 294

Query: 300 AVISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQFRDYAIL 359
           A+I+NNP+   K+LW++   G+PI++    +E  EA  +V R++   +E+     D AIL
Sbjct: 295 ALIANNPERLGKELWTDEADGEPISLYCAFNEMDEARFIVGRINDW-YEKGGNLSDCAIL 353

Query: 360 YRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRAITT 419
           YR N Q+R+ E+ L  + + Y + GG  FF++ EIKD   Y+RLI+N +DD AF R + T
Sbjct: 354 YRSNAQSRVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNT 413

Query: 420 PKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLAGRAA 479
           P RG+G+ TL++L T A Q +++L++A +    E  L  R    +R F + +V L     
Sbjct: 414 PPRGIGDRTLDILRTTARQQELTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEDTQ 473

Query: 480 SDPATQVLDDMMEGIHYEAYLYDTFDERQAQSRWTNTLEFLDWLKRKGTKPEATGEGEEA 539
                ++ D +++    +A +Y+     +A +R  N  E +                  A
Sbjct: 474 DMALYRMADTVIQASGLKA-MYEAEKGEKAHARIENLEELV----------------TAA 516

Query: 540 TGFDTADGFGDEGKNLLELTQTVALMSMLEGREED-PDAVRLSTLHASKGLEYPHVFLVG 598
             F+  +   D G+  L    + A +   EG+ +   DAV+L TLH++KGLE+  VF+ G
Sbjct: 517 RTFEMPEELEDMGE--LNAFLSHAALEAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAG 574

Query: 599 VEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRK-RARDTYSCEPSR 657
           VEEGI P     E+   ++++EERRL YVG+TRA   L++++ + R+   R+ Y+  PSR
Sbjct: 575 VEEGIFPSKMALEE--GDRLDEERRLCYVGMTRAMEKLYITYAESRRIYGREDYA-RPSR 631

Query: 658 FIGEMKLEEAPAIKDETPAMSP 679
           FI E+  +    I+ +    +P
Sbjct: 632 FIKEIPPQYVDEIRLKAQVSTP 653