Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 788 a.a., ATP-dependent DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  357 bits (916), Expect = e-102
 Identities = 246/687 (35%), Positives = 370/687 (53%), Gaps = 77/687 (11%)

Query: 5   LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAKE 64
           LN +Q  AV Y DGP LV+AGAGSGKTRV+T KIA+L+E+ G+QP +I A+TFTNKAA+E
Sbjct: 9   LNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEN-GYQPWNILALTFTNKAARE 67

Query: 65  MQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDCF 124
           M++RIA+ +  +  R         + + TFHS+  +ILRAEA+++G   +F+I DS D  
Sbjct: 68  MKDRIARQVGMERAR--------YLWMGTFHSVFSRILRAEAKYIGFTSQFTIYDSADSK 119

Query: 125 GMVQEQLAST--DKKLIRS--VQSTISLWKNGMVDPETAIARADNPDDHQAAL------I 174
            +++  +     D+K  +   VQ+ IS  KN +V P    A  +  +   AA       I
Sbjct: 120 SLIRSIIKEMGLDEKTYKPGMVQARISSAKNHLVSPTGYAANKEAYEGDMAAKVPAVREI 179

Query: 175 YRNYVATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLL 234
           Y  Y        A+DFDDL+     LF    EV  R++ + RY LVDEYQDTN  Q+ ++
Sbjct: 180 YTRYWERCRQAGAMDFDDLLVYTYILFRDFPEVLARYREQFRYVLVDEYQDTNYAQHSIV 239

Query: 235 KQLAGGSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRI 294
            QL   +         VGDD Q+IY +RGA +DN+      +P+ KV KLEQNYRST  I
Sbjct: 240 LQLTKENQ----RVCVVGDDAQSIYSFRGADIDNILYFTKVYPNTKVFKLEQNYRSTQTI 295

Query: 295 LEAANAVISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQFR 354
           + AAN++I  N +   K+++SE   G+PI V     +  E + V  +++  + E    + 
Sbjct: 296 VCAANSLIEKNERQIRKEVFSEKERGEPIGVFQAYSDVEEGDIVANKIAELRREHSYGYA 355

Query: 355 DYAILYRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFI 414
           D+AILYR N Q+R+FE+ LR+  +PY + GG SF+ + EIKD+ AY RL+ NP+D+ AF 
Sbjct: 356 DFAILYRTNAQSRVFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFK 415

Query: 415 RAITTPKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRL 474
           R I  P RG+G+TT+  + + A +  VSL+ A               EPL         L
Sbjct: 416 RIINYPARGIGDTTVGKIISAATENGVSLWAAL-------------CEPL------SYGL 456

Query: 475 AGRAASDPATQVLDDMMEGIHYEAYLYDTFDERQAQSRWTNTLEFLDWLKRKG------- 527
                +    Q   +++EG     ++ D  D+   +          D ++R G       
Sbjct: 457 NINKGTHTKLQGFRELIEG-----FMTDQVDKSAYEIG-------TDIIRRSGIINDVCQ 504

Query: 528 -TKPEATGEGEEATGFDTADGFGD-------EGKNLLELTQTVALMSMLEGRE----EDP 575
            T PE     E     +  +G  D       EG   + LT  ++ +++L  ++    +D 
Sbjct: 505 DTSPENLSRKENIE--ELVNGMNDFCALRQEEGNPNISLTDFLSEIALLTDQDSDKADDG 562

Query: 576 DAVRLSTLHASKGLEYPHVFLVGVEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRS 635
           + + L T+H++KGLE+ +VF+VG+EE + P     +  S   +EEERRL YV ITRA+  
Sbjct: 563 EKITLMTVHSAKGLEFKNVFVVGLEENLFPSGMVGD--SPRALEEERRLFYVAITRAEEH 620

Query: 636 LHLSWCKKRKRARDTYSCEPSRFIGEM 662
            ++S+ K R R        PSRF+ ++
Sbjct: 621 CYISFAKTRFRYGKMEFGSPSRFLRDI 647