Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 891 a.a., ATP-dependent DNA helicase PcrA from Bifidobacterium breve UCC2003

 Score =  381 bits (978), Expect = e-110
 Identities = 267/696 (38%), Positives = 368/696 (52%), Gaps = 71/696 (10%)

Query: 5   LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAKE 64
           LNP Q+EAV+Y     L+ AGAGSGKTRV+T++IA ++   G  P  I A+TFTNKAA E
Sbjct: 19  LNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFGAWPSQILAITFTNKAAAE 78

Query: 65  MQERIAKLMEGKTTREGKRIPIKQ-ITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDC 123
           M+ER+  L+           P+ Q + VSTFHS  V+ILR + + +GLK  FSI DS D 
Sbjct: 79  MRERLGSLIG----------PVAQRMWVSTFHSACVRILRRDGKSIGLKSGFSIYDSADS 128

Query: 124 FGMVQEQLASTDKKLI------RSVQSTISLWKNGMVDPETAIARADNPD---------- 167
             +V+  + +T+  L       RS+   IS  KN +   +  +A    PD          
Sbjct: 129 ERLVK--IIATEFNLDIKRYTPRSILGHISDLKNNLTGWKENLA-VHAPDFTPGQRGYQF 185

Query: 168 ----DHQA--ALIYRNYVATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVD 221
               D +A  A+IY  Y   L    AVDFDDLI    EL   +  V   + +R RY LVD
Sbjct: 186 GTVGDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFRYILVD 245

Query: 222 EYQDTNACQYQLLKQLAG------------GSHLRAPAF-TAVGDDDQAIYGWRGATLDN 268
           EYQDTN  QY L+++LAG             +    PA+ T VGD DQ+IY +RGA + N
Sbjct: 246 EYQDTNHAQYVLVRELAGVDTGEKAIPGSPNAGKSGPAWITVVGDSDQSIYAFRGADIRN 305

Query: 269 LKLLQTDFPDLKVVKLEQNYRSTVRILEAANAVISNNPKLFDKKLWSEHGMGDPIAVNPM 328
           ++  + DFP+ K + LEQNYRST  IL+AANAVISNN     KKLW+  G G+PI     
Sbjct: 306 IQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPIVGYAA 365

Query: 329 NDEEHEAESVVFRLSAHKFERRAQFRDYAILYRGNHQARLFEQILRRERIPYVLSGGQSF 388
           ++ + EA+ V   ++    E    + D AI+YR N Q+R  E+ L    +PY L GG  F
Sbjct: 366 DNAQQEAQWVATEIARLHAEEDIAYSDMAIMYRANAQSRSLEEALINAGLPYQLVGGTKF 425

Query: 389 FDKAEIKDICAYLRLIANPDDDPAFIRAITTPKRGVGNTTLEVLGTFAGQAKVSLFEAAM 448
           +++ EIKD  AYL+ + NPDDD    R +  PKRG+G+    +L  +A +   S F A M
Sbjct: 426 YERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGILLAYARERGTSFFYALM 485

Query: 449 MGGIEGKLQPRQLEPLRVFCEAMVRLA--GRAASDPATQVLDDMMEGIHYEAYLYDTFDE 506
                  +  R    L+ F + M  L+   RA     ++++ +++E     A L  + D 
Sbjct: 486 HLDEIQDVPTRTATQLKAFRDLMGELSQFTRAHDAKPSEIVAEVLEKSGLRAELEKSVDP 545

Query: 507 RQAQSRWTNTLEFLDWLKRKGTKPEATGEGEEATGFDTADGFGDEGKNLLELTQTVALMS 566
           + A     + LE L  L+          E E+ T   T   F       LE T  VA   
Sbjct: 546 QDA-----SRLENLSQLQ------STAAEFEQNTPDATLSAF-------LETTALVADSD 587

Query: 567 MLEGREEDPDAVRLSTLHASKGLEYPHVFLVGVEEGILPHCREDEDMSDEKIEEERRLMY 626
            L G  ED   V L TLH +KGLEYP VFL G+E+G  PH R  ED ++  ++EERRL Y
Sbjct: 588 QLPGEAEDSGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTE--LQEERRLAY 645

Query: 627 VGITRAQRSLHLSWCKKRKRARDTYSCEPSRFIGEM 662
           VGITRA+R L+++    R +        PS+F+ E+
Sbjct: 646 VGITRAKRRLYVTRAAVRSQWGQAADMMPSQFLDEI 681