Pairwise Alignments

Query, 279 a.a., AraC family transcriptional regulator from Cupriavidus basilensis FW507-4G11

Subject, 268 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 28/257 (10%)

Query: 29  SGAAYLPHTHPTLSIGAVDGGHSLFGTETESVRLAPGDVVVIPAGQVHACNPEPDARWSY 88
           +G  + PH H T +IG    G   F     +    PGD  V+   ++H      +A + Y
Sbjct: 26  AGYGFAPHRHDTYAIGCTVSGVHRFNYRKCARNSLPGDTFVLHPDELHDGEAGSEAGFRY 85

Query: 89  QMLHLDPAWVGTVLAARGVAVLPAALAR-VRVTRAPDTYA--------GLCRLNDVLFSA 139
           + ++++PA +   L  + +  +   ++R  R+ RA  +          GL    D L+  
Sbjct: 86  RAVYIEPALLQGPLGGQPLPFIDDGVSRDPRLQRAIGSLLQCLDRPLEGL-EEQDALYDL 144

Query: 140 APQATKDAALGGFLAALLGAADLRQAVRAPRQPVTPEARLAGLVARLHAHHAEPLPLAEL 199
           A    K A   G   ++    D R A RA                 +H    +P+ L EL
Sbjct: 145 AQIMAKVARTKGRRRSV----DFRAAERARDY--------------IHEFLTQPISLDEL 186

Query: 200 ARGAGMSRYQLIRAFRADLGMTPHAYQLDLRINHARQLLRAGGAPAEIAQVLGFSDQSHF 259
            R +   R+ L R FRA  G +P+ Y    R++  R+LL  G AP++ A + GF DQSH 
Sbjct: 187 ERVSDRDRWSLSRDFRALFGTSPYRYLTLRRLDQVRRLLLGGSAPSDAALIAGFVDQSHM 246

Query: 260 QRAFKQRVALTPRSYQR 276
            R FKQ   L P  + R
Sbjct: 247 SRQFKQAYGLPPGHWLR 263