Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Cupriavidus basilensis FW507-4G11

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (377), Expect = 6e-41
 Identities = 105/294 (35%), Positives = 145/294 (49%), Gaps = 12/294 (4%)

Query: 7   RVPPLHLLIAFEAAARLGSFARAAEELSVTPSAVSHRIKNLEELWGEDLFVRANAALRLT 66
           R+PPL+ + AFEAAAR  SF RAAEEL VT +AVSH+IK LE+  G  LF R N +L LT
Sbjct: 4   RLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLT 63

Query: 67  AAGTRYLRSVQDALKALNE-----LARPEYNKLRTRLRVAIPPTFGRQHLVPRLPEFTAL 121
             G  Y   ++D    L +     LAR         L V++ P+F  Q LVPRL +F+  
Sbjct: 64  EEGQSYFLDIKDIFTQLADATDRLLARSAIGS----LTVSMSPSFAIQWLVPRLSKFSEK 119

Query: 122 YPHIDTELHLAIPFLDVKAEDTDVEIRYGTGRYPDLKTTKLLVEPVFPACGREYYERIDG 181
            P ID  +           +D DV I YG G +P L+  KL  E + P C          
Sbjct: 120 NPDIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLN--GP 177

Query: 182 RAITRPEHLHNLVLLRS-PLEPWKPWFETAGLDWPEPQTGPQFNDIGLMLEAIASNQGVA 240
           + +++PE L    LL       W+ WF   G+       GP F+   L+L+A A  QGVA
Sbjct: 178 KPLSKPEDLKYHTLLHDMSRHDWQAWFRQCGIHDINVNQGPIFSHSSLVLQAAAHGQGVA 237

Query: 241 LVRQRMARHWLSLGQMVRLLDIESVSPHGYYIVEREQAPLKPEARYFVDWLLSL 294
           L    +AR  +  G++V       VS   YY+V ++      +   F +W+L +
Sbjct: 238 LGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDM 291