Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 330 a.a., ribosomal large subunit pseudouridine synthase C protein from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 1e-42
 Identities = 114/305 (37%), Positives = 157/305 (51%), Gaps = 23/305 (7%)

Query: 28  DEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDVVRIPPMRV- 86
           DEA G R+D +      G+    + ++LRSG++RV+  R  +  R+Q G  +RIPP+ V 
Sbjct: 12  DEA-GMRLDRWFKVHFPGLGFGPLQKLLRSGQIRVDGARAKSDTRIQPGQTIRIPPLGVD 70

Query: 87  ---AASAPDAGKFVPPA------SFPVVFEDEYLLVINKPAGVAVHGGSGVAFGVIEQLR 137
              A S P  G+ +  +      S  V+ ED  ++V+NKPAG+AV GGSGV   + + L 
Sbjct: 71  PKEAKSGPIGGRDLRQSPDGELLSRMVLHEDAKVIVLNKPAGLAVQGGSGVNRHIDKMLE 130

Query: 138 RARPQ-ARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHFENA 196
               Q      LVHRLDR+TSG+LV+A+ R A   L    R     K Y+A V G     
Sbjct: 131 AWTSQKGEKPRLVHRLDRDTSGVLVVARTRGAAQQLTAAFRERDTKKTYWALVRGVPRKR 190

Query: 197 RQHVKFPLYKYTTPEGERRVRVQ---EDGIASHTVFNRLEVMPGYTL--LEAELKTGRTH 251
              +   L K  TP+G+ RVR+    EDG      + R+    G  L  LE E  TGRTH
Sbjct: 191 EDKISTWLVKEPTPDGD-RVRIAKHGEDGADHAISYYRIVEQAGQNLAWLEMEPYTGRTH 249

Query: 252 QIRVHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTFTHPISGEITTV 311
           Q+RVH AH G PI+GD KY +  +N        N    R+ LHA  +   HP  G +  +
Sbjct: 250 QLRVHAAHIGHPIIGDPKYFEADVNWTFPGGMQN----RLHLHARHIDIPHPNGGRL-KI 304

Query: 312 VAPMP 316
            AP+P
Sbjct: 305 TAPLP 309