Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 330 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  279 bits (713), Expect = 8e-80
 Identities = 156/309 (50%), Positives = 199/309 (64%), Gaps = 9/309 (2%)

Query: 20  QVAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDVV 79
           QV  ++I ++  GQRIDNFLL   KGVPKS +YRI+R GEVRVNK R+   Y+L  GD V
Sbjct: 19  QVQLISIDEDGAGQRIDNFLLAKLKGVPKSMIYRIVRKGEVRVNKKRIKPEYKLAAGDEV 78

Query: 80  RIPPMRVAA----SAPDAG-KFVPPASFPVVFEDEYLLVINKPAGVAVHGGSGVAFGVIE 134
           R+PP+RVA     +AP A    V      ++FED+ ++V+NKPAG+AVHGGSGV +GVIE
Sbjct: 79  RVPPVRVAEKDYRTAPSANLNRVAQLEDRILFEDKQIIVLNKPAGIAVHGGSGVDYGVIE 138

Query: 135 QLRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHFE 194
            LR  RP  +FLELVHRLDR+TSG+L++AKKR AL +LH+Q+R   + K Y A V G ++
Sbjct: 139 SLRSLRPTCKFLELVHRLDRDTSGVLLIAKKRMALRHLHDQLRNKQMQKVYQALVRGQWQ 198

Query: 195 NARQHVKFPLYKYTTPEGERRVRVQEDGIASHTVFNRLEVMPGYTLLEAELKTGRTHQIR 254
              + VK PL K T   GER VRV  +G  S T F  L      +L+EA   TGRTHQIR
Sbjct: 199 EHDRVVKAPLLKITLKSGERIVRVNSEGKPSETRFRVLRRFDEASLVEASPVTGRTHQIR 258

Query: 255 VHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTFTHPISGEITTVVAP 314
           VH  + G PI  D+KY +   + A+       GL+R+FLHA  LTFTHP S    TV AP
Sbjct: 259 VHCQYQGHPIACDDKYSEQKFDDAMRAK----GLQRLFLHAAQLTFTHPESETQMTVQAP 314

Query: 315 MPPECEAFL 323
           +  +  A L
Sbjct: 315 LDGDLTAVL 323