Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

 Score =  148 bits (373), Expect = 2e-40
 Identities = 108/316 (34%), Positives = 160/316 (50%), Gaps = 23/316 (7%)

Query: 24  VTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDVVRIPP 83
           +T+ ++   QRID +L +L   V +  + ++ R GE+R++ GRV A  R+  G VVR+PP
Sbjct: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61

Query: 84  MRVA----ASAPDAGKFVPPASF---PVVFEDEYLLVINKPAGVAVHGGSGVAFGVIEQL 136
           +  +    A AP        A      V+++D+ ++V+NKPAG+AV GGSG    V    
Sbjct: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121

Query: 137 RRARPQARFL-ELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHFEN 195
              +  A     LVHRLD++TSG+LVLA+ R A  +L    R  A  K Y+A VAG    
Sbjct: 122 AALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPTP 181

Query: 196 ARQHVKFPLYKY----TTPEGERRVRVQEDGI-------ASHTVFNRL-EVMPGYTLLEA 243
               +K  L K      + EGE+ + +  + +        SHT +  L  V      +  
Sbjct: 182 YLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVAM 241

Query: 244 ELKTGRTHQIRVHLAHSGFPILGDEKYGDYALNKALARSGANPG---LKRMFLHAHSLTF 300
           E  TGRTHQ+R H+A  G PI GD KYG  +        GA  G    K++ LH   + F
Sbjct: 242 EPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMAF 301

Query: 301 THPISGEITTVVAPMP 316
            HP + +  ++ AP+P
Sbjct: 302 EHPTTKKPLSITAPLP 317