Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 348 a.a., pseudouridine synthase, RluA family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  144 bits (362), Expect = 4e-39
 Identities = 106/326 (32%), Positives = 161/326 (49%), Gaps = 35/326 (10%)

Query: 21  VAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDVVR 80
           V  +T+G +   QR+D +L +    + +  + ++ R GE+RV+ GRV    RLQ G  VR
Sbjct: 4   VQTLTVGVDEGDQRLDRWLRRRFPHLGQGRIEKMCRKGELRVDGGRVKPATRLQTGQAVR 63

Query: 81  IPPM---------RVAASAPDAGKFVPPASFPVVFEDEYLLVINKPAGVAVHGGSGV--- 128
           +PP+            A   DA + +   +  V++ D  +L +NKPAG+ V GGSG    
Sbjct: 64  VPPLPAPGEITARPARARISDADREMLQGT--VIYRDADILALNKPAGLPVQGGSGQERH 121

Query: 129 AFGVIEQLRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFAC 188
             G+ E L+    +     LVHRLD++TSG+L++A+ R +   L    R     K Y+A 
Sbjct: 122 IDGMAEALQFELDEPP--RLVHRLDKDTSGVLLMARTRRSAAALTAAFRARQTRKIYWAA 179

Query: 189 VAGHFENARQHVKFPLYKY----TTPEGERRVRVQEDGIASHTVFNRLEVMPGYTLLEAE 244
           VAG  +     V++ L K        EGE+ + +    + +H    R      Y +L A 
Sbjct: 180 VAGVPQPQLGTVRYALMKAPGHGKRGEGEKMLCIDPRQMDAHPDAKR--ATTDYAVLSAL 237

Query: 245 LK----------TGRTHQIRVHLAHSGFPILGDEKYGDYALNKALARSGANPG---LKRM 291
            +          TGRTHQ+R H+A  G PI+GD KYG           GA  G    K++
Sbjct: 238 GRRVAWCVLVPITGRTHQLRAHMAELGHPIIGDGKYGGSGQENLGDGWGAQLGGEMSKKL 297

Query: 292 FLHAHSLTFTHPISGEITTVVAPMPP 317
            LHA  L+ THP++G   ++ AP+PP
Sbjct: 298 HLHARHLSLTHPVTGAQLSLTAPLPP 323