Pairwise Alignments

Query, 563 a.a., lytic transglycosylase from Cupriavidus basilensis FW507-4G11

Subject, 477 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  214 bits (546), Expect = 5e-60
 Identities = 145/475 (30%), Positives = 235/475 (49%), Gaps = 34/475 (7%)

Query: 7   LAVVACAALLAACASTPTPPEGADGATATASASRPAISKPDPLNSINSAGVINVDRDSMD 66
           + +    A L+ CA+T          +A  S +      P+  +   SA   +V+ + +D
Sbjct: 14  MVIAMLMAQLSGCATT----------SAQTSPTEFGAGLPEAEDHSESAEPQSVEAEVID 63

Query: 67  WLRGPSSDIWDRIRRGFGMPDLEGTLVDDRTQWYAQRPEYMERMVGRSSRYLYHIVEELE 126
                 +D+W++I+    +   +   V  +  ++  + ++M ++  R+  +LY+IV +LE
Sbjct: 64  ---ERYADVWEKIQHARTIDVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQLE 120

Query: 127 RRKMPTELALLPFVESAFNPQAESTAKAAGMWQFIPSTGKSYNLKQNMFRDERRDVLAST 186
            R MP ELALLP VES +NP A++   A G+WQ IP+TG+++ L  N   D R+D LAST
Sbjct: 121 ARNMPLELALLPIVESGYNPLAQANGPA-GLWQMIPATGRNFGLTINSAYDGRKDALAST 179

Query: 187 DAALDYLQRLYDMFG-DWQLALAAYNWGEGAVSRAIARNQARGLPTDYASLNMPNETRYY 245
           DA LDYLQ LY+  G DW  A+A YN GE  +  AI RN+A+G PTD+ SLN+P      
Sbjct: 180 DAVLDYLQHLYNTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT 239

Query: 246 VPKLQAVKNIIANPQMYGVKLPDIPDHPYFVTVTTSRDIDVKLAAKLANLPLDEFKALNP 305
           VPK  A   II  P  Y +K+  I + P+   +     +++   A  A L   EFK  NP
Sbjct: 240 VPKWLAFIQIIREPSHYNLKVMPIANRPFLERLPAPNGVEISQIANAAGLTKAEFKTYNP 299

Query: 306 SFNRPVILGAANPQILLPFDNAERFQYNLN-TYRGGLSSWTAVTVDNRERIEALAARLNI 364
            + + VI      QI LP +N   +Q N +  Y           V + + +  +AA+ ++
Sbjct: 300 GYRQSVIPSKGKYQIALPIENIGHYQENQHKLYAQKRYDSQTYIVKSGDSLGTIAAKFDL 359

Query: 365 DADTIREINRIPKGMRLKAGS--TVVVPRSEDRNQ----------DISATLAES----AT 408
               +++ N +    RLK G   T++ P + + N+          D S+T A +    AT
Sbjct: 360 SVKELKQANNLTSD-RLKIGQELTLLTPMAANDNEPEPVKTKANTDKSSTKANASSTKAT 418

Query: 409 MAMEPDVPDARRVVVRAGRRDTVATLAHRYGVSAGQVQSWNKLSGTKLV-AGQSL 462
            +   D P A+    +    D++  +A +  V    +  WN+L+   ++  GQ L
Sbjct: 419 SSKSTDKPVAKAKTYKVKSGDSLDKIARKSKVKLADLMKWNQLNAKSIIKPGQEL 473