Pairwise Alignments

Query, 350 a.a., microcin ABC transporter permease from Cupriavidus basilensis FW507-4G11

Subject, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  219 bits (558), Expect = 8e-62
 Identities = 124/340 (36%), Positives = 194/340 (57%), Gaps = 24/340 (7%)

Query: 5   LLKRVLLMIPTLLGVITLTFAVIQFVPGGPVEQMMLELKGRGGGGGEASGGGAEYRGRRG 64
           +L+++  M+   LG+  + F VI   PG P +   LE       G EA            
Sbjct: 16  MLRKLAWMVVVFLGITVICFWVIHLAPGSPTD---LETTMNPLAGAEAR----------- 61

Query: 65  VDPDKIKEIQALYGFDKPPLERYFMMLKRFARFDLGQSYFQH-RSVWELVKSKMPVSVSL 123
                 K ++++YG D+P   +Y   L R  R D G S     R V E ++ ++P++V +
Sbjct: 62  ------KRLESIYGLDQPLYVQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTVGM 115

Query: 124 GLWTFFLTYLISVPLGISKAIRAGSRFDVVTSMVVLVGYAIPGFVLGVLLLVLFGGGTFV 183
            +   FLT L++VP+G++ A   G  FD   +++V +G+A+PGF L +LL++ FG    +
Sbjct: 116 NVAALFLTLLLAVPIGVASAHWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFG--IHL 173

Query: 184 QWFPLRGLTSDNWDQLTLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRKQY 243
            W PL GLTS ++  L+  GK +D   HL LP+     GS A ++   ++A LE +R+ Y
Sbjct: 174 GWLPLSGLTSLDYATLSPWGKFLDVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQDY 233

Query: 244 VLTARAKGLAERRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLLSY 303
           +LTARAKGL  R V+++H  RNAL+P++T    +  G    GS++IE++F+L GLG L Y
Sbjct: 234 ILTARAKGLPTRTVIFRHALRNALLPVITILGLSLPG-LIGGSVIIESIFALPGLGQLFY 292

Query: 304 EAVLRRDYPVVLGTLYLFTLIGLVTRLISDVCYVMVDPRI 343
            AV+ RDYP+++G L L  ++     LI+D+CY + DPRI
Sbjct: 293 TAVMARDYPLIMGNLVLGAVLTQAGNLIADLCYGLADPRI 332