Pairwise Alignments

Query, 308 a.a., cytochrome oxidase subunit III from Cupriavidus basilensis FW507-4G11

Subject, 323 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella loihica PV-4

 Score =  254 bits (648), Expect = 2e-72
 Identities = 138/322 (42%), Positives = 185/322 (57%), Gaps = 31/322 (9%)

Query: 6   TDFWSYYIAAIALVGIVWCVWLLFSQRKVTKVVGAPEDTGHVWDGDLRELNNPLPRWWMW 65
           + FWS +I  + +V I  C  LLF   K T  V   +  GH +DG + E+NNPLP+WW +
Sbjct: 3   SSFWSIWITVLTIVVIAGCFILLFVVSKNTTGVEEGKSMGHSFDG-IEEINNPLPKWWSY 61

Query: 66  MFLLACIFGLGYLVLYPGLGSYAGVLKTSSR-----------------VELEAHRQAAEQ 108
           MF +  IFG+ YL  YPGLG+Y G L  SS                  VEL A+     Q
Sbjct: 62  MFYITIIFGVVYLAAYPGLGNYKGFLGWSSSNQSIGTEKGIKEDSAAAVELAANEHRWVQ 121

Query: 109 LQREV----------YGKYMQMDVKQVAAEPAAREIGQRLFLNYCAQCHGSDARGSRGFP 158
             +EV          +  Y+   ++++     A ++G RLFL  CAQCHGSDARGS+GFP
Sbjct: 122 YDQEVEKANAKYSPIFAAYLATPLEELVKNEEALKVGGRLFLQNCAQCHGSDARGSKGFP 181

Query: 159 NLTDNDWLYGGDPETITQTITKGRNGVMPSFAS--TIDGKLAGDVAQYVRSLSGLSSDPI 216
           NLTD DWLYGGD  TI  TI  GRNG+MP        D +L G +A+YV  LSG   D  
Sbjct: 182 NLTDGDWLYGGDLATIKTTIMNGRNGMMPPKGGLPIEDSELKG-LAEYVVKLSGRDHDEA 240

Query: 217 RASRGESTFKSTCAACHGSTGKGNQALGAPNLSDRVWLYGSSEANIVDAILKGHNNHMPA 276
            A++G+++F   C ACHG  G GN+ +GAPNL+D  WLYG S   I ++I  G +  MPA
Sbjct: 241 LAAQGQASFMKGCFACHGMDGTGNKFMGAPNLTDNTWLYGGSRGVIQESIKNGRSGVMPA 300

Query: 277 HEEILTPERIRMLTAYVWGLSN 298
            +++L  E++ ++ AYV+ LSN
Sbjct: 301 WKDVLGEEKVHVIAAYVYSLSN 322