Pairwise Alignments

Query, 533 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

Subject, 478 a.a., cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  243 bits (620), Expect = 1e-68
 Identities = 132/444 (29%), Positives = 223/444 (50%), Gaps = 16/444 (3%)

Query: 80  VVFLFICCAMVWLVVASLAGLTASVKLHEPDLLASVPWLSFGRIRTIHLNAVAYGWAPMA 139
           +V  F    ++W +V    G+  + +L  P L    PW ++ R+R +H NAV + +   A
Sbjct: 16  IVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRPLHTNAVIFAFGTSA 75

Query: 140 GLSIALFLLPRLLKTRLAGAKYAVLGAALWNAGLIAGLGSIAAGISDGLEWLEIPWQVDI 199
             + + +++ R  +TRL   K A      W A +++   ++  G + G E+ E+ W +DI
Sbjct: 76  LFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYTSGKEYAELEWPIDI 135

Query: 200 LLVAGGALVGMPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVANIP---------GL 250
            +        +    T++ R   H+YV+ W+ G  +    VL +V ++           +
Sbjct: 136 AITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSM 195

Query: 251 HFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALAFFYG 310
           + G   A + WW+GHN +G   T   L  +YYF+PK  G+PV SY LS++ FWAL   Y 
Sbjct: 196 YSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSYRLSIVHFWALIALYI 255

Query: 311 QVGGHHLIGGPVPGWLITLSIVQSMMMLVPVIAFSINQHQTMRGHFHRLIDSPTLRFVTF 370
             G HHL    +P W  +L +V S+++  P     IN   T+ G +H+L   P LRF+  
Sbjct: 256 WAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVV 315

Query: 371 GGMMYTLSSAQGSFEALRAVNRVTHFTHYTVAHAHLGLYGFVSFAFFGAIYFMVPRVTGR 430
               Y +S+ +G   A++ VN ++H+T +TV H H G  G+V+    G++Y ++P + G 
Sbjct: 316 SLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGSLYHLIPVLFGH 375

Query: 431 EWPYR-WLIYAHFWLAVAGIGVYFIGLSIGGTLQG--YAMLDA----SKPFMDSVAVTIP 483
              Y   L+  HFWLA  G  +Y + + I G +QG  +  ++A    +  F++S+  + P
Sbjct: 376 GRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADGTLTYSFVESLEASYP 435

Query: 484 YLKARSVGGGMMLLGHLCFVANFV 507
           +   R +GG   L G L    N +
Sbjct: 436 FYFVRFLGGCFFLTGMLIMAYNVI 459