Pairwise Alignments

Query, 1153 a.a., transcription-repair coupling factor from Cupriavidus basilensis FW507-4G11

Subject, 1198 a.a., transcription-repair coupling factor Mfd from Dechlorosoma suillum PS

 Score = 1542 bits (3993), Expect = 0.0
 Identities = 776/1153 (67%), Positives = 915/1153 (79%), Gaps = 8/1153 (0%)

Query: 1    MPEANRPVPFANLPLVKAGQRYTVSGLPGSADALALAAYASQHRERVPMLAVVCANAVDA 60
            +PE    +  A   L ++G+R  +  L GSADALALA   SQ R +  +LAV+ A+  DA
Sbjct: 51   LPELPPEISRALAQLPRSGERLHLPPLAGSADALALARLGSQARSQKRLLAVLTASPADA 110

Query: 61   QRLAEEIPWFAPSLRVRLLPDWETLPYDSFSPHQDLVSERLATLHDIQGGQCDIMLVPAQ 120
            QRL EEIPWFAP L+VRLLPDWETLPYD+FSPH DLVSERLATL+ +  G+C+++LVPA 
Sbjct: 111  QRLLEEIPWFAPDLKVRLLPDWETLPYDNFSPHHDLVSERLATLYAVSRGECEVLLVPAT 170

Query: 121  TALYRLAPPAFLAAYTFFFKQGEKLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDL 180
            TA+YRL PP++LAAYTFF K+GEKLD    ++Q TLAGY HV+ V+ PGEYS+RGGL+DL
Sbjct: 171  TAVYRLTPPSYLAAYTFFLKKGEKLDAEQFRSQLTLAGYTHVTQVVSPGEYSIRGGLVDL 230

Query: 181  FPMGSPLPYRIDLFGNEIETIRAFDPDTQRSLYPVKEVRLLPGREFPLDDAARTAFRGRW 240
            FPMGS LPYRIDLF  EIET+R FD DTQRSLYPV E+RLLP REFPLDD  RT FR R+
Sbjct: 231  FPMGSALPYRIDLFDEEIETLRTFDADTQRSLYPVPEIRLLPAREFPLDDGGRTRFRQRF 290

Query: 241  RELFEGDPSKSTIYKDIGNGVPSAGIEYYLPLFFESSATVFDYLPANSQLAFAGDVPDAI 300
            RE+FEGDP+KS IYKD+ NGVPSAGIEY+LPLFFE +AT+FDYLP ++ L    DV  A+
Sbjct: 291  REVFEGDPAKSGIYKDVSNGVPSAGIEYWLPLFFEETATLFDYLPKDAVLCQHRDVALAL 350

Query: 301  RRFWADTTQRYNFMRHDRERPLLPPAALFLSEEQFFTGAKPLARLVLQGTATGDTVPLAE 360
            + FW DT  RYN +  D+ RPLLPPA LFLSEEQFF  AK  A+L+L GT      PLA 
Sbjct: 351  QDFWRDTQSRYNMLAGDKARPLLPPAELFLSEEQFFVAAKDYAKLIL-GTPAEGMPPLAT 409

Query: 361  SLPDVSVNRRAEDPLVNLEALLL-KKDRRVLMCADSAGRRETLLQLFGESGLRPQPIDDY 419
            ++P V+V RRAEDPL  L+  +  ++ RR L+ A+SAGRRETL QL  E GL+P    D+
Sbjct: 410  AVPTVAVERRAEDPLTALKQFIAGRQGRRTLLLAESAGRRETLQQLLLEHGLKPAASADF 469

Query: 420  AAFLAGDSHFSIVVAPLQSGFAVPSAQGIEPLAFVTEAELYAGTARRTGRRKQEQASAVD 479
            AAFL GD+  ++ VAPLQSGF       ++ LA +TE ELYAG+  R  R+  ++ +++D
Sbjct: 470  AAFLGGDAPLALGVAPLQSGFC------LDGLAIITETELYAGSPNRRSRQNAQRRASMD 523

Query: 480  SMVRDLAELKIGDPVVHSEHGIGRYQGLVSLDLGQGEEEFLHLDYEKGSKLYVPVHQLHV 539
            + +RDL ELK+GDPVVH  HGIGRY GL+ LDLG+G+ EFL L Y   +KLYVPV QLHV
Sbjct: 524  NWLRDLTELKVGDPVVHESHGIGRYMGLLHLDLGEGDTEFLELHYANEAKLYVPVSQLHV 583

Query: 540  ISRYSGADPDTAPLHSLGSGQWDRAKRRAAQQIRDTAAELLNLYARRALRQGHAFELTPK 599
            ISRYSG +PD APLHSLGSGQW++AK++AA+Q RDTAAELL LYA RA RQGHAF  T  
Sbjct: 584  ISRYSGNEPDAAPLHSLGSGQWEKAKKKAAEQARDTAAELLALYAARAARQGHAFAFTEN 643

Query: 600  DYEKFAESFGFEETPDQAAAIAAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVMG 659
            DYE FA+ FGFEET DQA AIAAVI DM SGKPMDRLVCGDVGFGKTEVALRAAFVAV G
Sbjct: 644  DYEAFADGFGFEETEDQATAIAAVIEDMKSGKPMDRLVCGDVGFGKTEVALRAAFVAVAG 703

Query: 660  GKQVAILAPTTLLAEQHFQNLSDRFAEWPVRIVELSRFKTKKEIDGAIKQINDGTADIVI 719
            GKQVA+L PTTLL EQH+Q   DRFA+WPV+I ELSRFKT KE   A+K +  G  DIVI
Sbjct: 704  GKQVAVLCPTTLLCEQHYQTFKDRFADWPVQIAELSRFKTAKETAQAMKDLEAGKIDIVI 763

Query: 720  GTHKMLSDDVKFQRLGLVVIDEEHRFGVRQKEMLKTLRAEVDVLTLTATPIPRTLGMALE 779
            GTHK+LS ++KF RLGLV+IDEEHRFGVRQKE LK LRAEVDVLTLTATPIPRTL M+LE
Sbjct: 764  GTHKLLSKEMKFDRLGLVMIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLAMSLE 823

Query: 780  GLRDFSVIATAPQKRLAIKTFVRREEDGVVREAILRELKRGGQVYFLHNEVDTIENKRAK 839
            GLRDFSVIATAPQKRLAIKTFV +  DG++REA+LRELKRGGQVYFLHNEVDTI+N R K
Sbjct: 824  GLRDFSVIATAPQKRLAIKTFVAKFSDGIIREAVLRELKRGGQVYFLHNEVDTIDNMREK 883

Query: 840  LAELVPEARIAVAHGQMHERELERVMRDFVARRDNILLCTTIIETGIDVPTANTILIHRA 899
            L  LVPEARI V HGQM+ERELERVMRDF  +R N+LLCTTIIETGID P ANTILI+RA
Sbjct: 884  LQSLVPEARIVVGHGQMNERELERVMRDFTQQRANLLLCTTIIETGIDNPHANTILINRA 943

Query: 900  DKFGLAQLHQLRGRVGRSHHQAYAYMLVHDVEGLSKLAQRRLEAIQQMEELGSGFYLAMH 959
            +KFGLAQLHQLRGRVGRSHHQAY+Y+LV D + L+K A++RLEAIQ MEELG+GFYLAMH
Sbjct: 944  EKFGLAQLHQLRGRVGRSHHQAYSYLLVQDEKALTKQAKQRLEAIQHMEELGAGFYLAMH 1003

Query: 960  DLEIRGAGEVLGDKQSGEIHEIGFQLYTDMLNAAVKSLKAGKEPDLMAPLAVTTEINLGT 1019
            DLEIRGAGEVLG+ QSGE+ E+GF LYT+MLN AV +LK G+EPDL  PL VTTEINL  
Sbjct: 1004 DLEIRGAGEVLGENQSGEMQEVGFNLYTEMLNRAVAALKQGREPDLTQPLGVTTEINLHA 1063

Query: 1020 PALLPSDYCTDVHERLSLYKRLANCEAAERVDDIQEELIDRFGRLPPQAQALIETHRLRI 1079
            PALLP  Y  DVHERL+LYKRL+NCE  E ++ +QEELIDRFG LPPQ Q L+ THRLR+
Sbjct: 1064 PALLPDAYAPDVHERLTLYKRLSNCETEEDINALQEELIDRFGELPPQGQCLLATHRLRL 1123

Query: 1080 AAVPLGVRKIDASDAAISMQFLPNPPIDAMKIIDLVQKNRHIKLAGQDKLRIEAKMPDVA 1139
             A PLG+ K+DA+ + +++QF PNPPI+ ++II+L+QKNRH KLAGQDKL +   MP + 
Sbjct: 1124 LARPLGIVKLDATASQLTVQFCPNPPIEPIRIIELIQKNRHFKLAGQDKLAVVRHMPTLK 1183

Query: 1140 VRAQTIKHTLRQL 1152
             R   +K   RQL
Sbjct: 1184 ERVDAVKDLFRQL 1196