Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 569 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  548 bits (1413), Expect = e-160
 Identities = 297/552 (53%), Positives = 383/552 (69%), Gaps = 14/552 (2%)

Query: 24  PTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYDCD 83
           P L R+ +ARGV+  AEL   L  L P   +KGID A   L  A+   +R+LIV D+D D
Sbjct: 20  PLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLLVTALEQRQRILIVGDFDAD 79

Query: 84  GATACAVGVRGLRMLGA-RIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIASV 142
           GATA  VG+ GLR+LGA  +DY+VPNRFEYGYGLTPEIV +A  ++P +++TVDNGI+SV
Sbjct: 80  GATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVALTREPHLLITVDNGISSV 139

Query: 143 DGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLALR 202
           +GVAAA   G+ V+VTDHHLPGD+LP A  IVNPNQPGCEFPSK LAGVGV+FYVL+ALR
Sbjct: 140 EGVAAAKKAGLKVLVTDHHLPGDELPLADAIVNPNQPGCEFPSKALAGVGVIFYVLMALR 199

Query: 203 AELRRRGVFDAQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMHAGVA 262
           A LR  G ++++ QP +  LLDLVALG+VADVV LD+NNRILV QGL+R+RAGR  AG+ 
Sbjct: 200 ARLRSLGWYESKPQPNIGELLDLVALGSVADVVPLDANNRILVHQGLERIRAGRARAGIK 259

Query: 263 ALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQELDGM 322
           A+   A R+ +R  + DLGF +GPRLNAAGRL DMSLGIECLLT+DA  A E+A +LDGM
Sbjct: 260 AILEVAKRDHSRITSTDLGFILGPRLNAAGRLDDMSLGIECLLTEDAGAAREMAAQLDGM 319

Query: 323 NRERRDIEAGMQQEAL-QILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEKYHR 381
           N++R+ IE GMQ+EAL Q+ + P+ ++     F + +F+  WHQGVIGI+ASR+KE+Y R
Sbjct: 320 NQDRKSIEQGMQREALAQLKDLPVESMP----FGLCLFDPEWHQGVIGILASRMKERYFR 375

Query: 382 PTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGADSFG 441
           PTI FA   +  +KGSGRS+ GFH+RDAL +V+ +HP L+ K+GGHAMAAGLTL   +F 
Sbjct: 376 PTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPNLISKYGGHAMAAGLTLPEANFP 435

Query: 442 QFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWGQGFPAPTFCGE 500
            F EAF+A  R  L +E L   + +DG +    F  E    L     WGQ FP P F G 
Sbjct: 436 LFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHAGPWGQHFPEPLFHGV 495

Query: 501 FDVLRQSVLKGKHLKLQLGR--GSQRFDAIWFNHADSLGASALV-----AYRLDNNTFNG 553
           F ++ Q V+  +HLK+ L    GS + D I F     +  +  +     AY+LD N F G
Sbjct: 496 FQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDIWPNPTIKWVELAYKLDLNEFRG 555

Query: 554 ITRVQMVIEHAQ 565
              VQ++I H +
Sbjct: 556 NETVQLMIAHIE 567