Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 571 a.a., single-stranded-DNA-specific exonuclease RecJ from Pseudomonas stutzeri RCH2

 Score =  541 bits (1393), Expect = e-158
 Identities = 303/554 (54%), Positives = 376/554 (67%), Gaps = 16/554 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           L P L R+ +ARGV    EL   L  L P   +KGID A   L +A+   +R+L V D+D
Sbjct: 18  LPPLLQRLYAARGVTCAEELDKGLARLIPYKQLKGIDAAVELLVEALEKRQRILFVGDFD 77

Query: 82  CDGATACAVGVRGLRMLGA-RIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGATA  VGV GLR LGA  +DY+VPNRFEYGYGLTPEIVA+A +++PD++VTVDNGI+
Sbjct: 78  ADGATASTVGVLGLRQLGAAHVDYLVPNRFEYGYGLTPEIVAVALQREPDLLVTVDNGIS 137

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           SVDGVAAA A G+ V+VTDHHLPG +LP A  IVNPNQP C FPSK +AGVGV+FYVLLA
Sbjct: 138 SVDGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPECAFPSKCIAGVGVIFYVLLA 197

Query: 201 LRAELRRRGVFDAQ--TQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMH 258
           LRA LR    F  Q   +P L  LLDLVALG+VADVV LD+NNRILV QGL R+RAGR  
Sbjct: 198 LRARLRELDWFVRQGWAEPNLAELLDLVALGSVADVVPLDANNRILVHQGLARIRAGRAR 257

Query: 259 AGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQE 318
           AG+ A+   AGR+  R  + DLGF +GPRLNAAGRL DMSLGIECLL +D   A ++A +
Sbjct: 258 AGLRAILEVAGRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIECLLCEDEALARDMAVQ 317

Query: 319 LDGMNRERRDIEAGMQQEAL-QILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKE 377
           LD +N++R+ IE GMQ+EAL Q+ + PL  L     F + +F   WHQGVIGI+ASRLKE
Sbjct: 318 LDELNKDRKSIEQGMQREALAQLKDLPLEDLP----FGLCLFEADWHQGVIGILASRLKE 373

Query: 378 KYHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGA 437
           +YHRPTI FA   +  +KGS RS+PGFH+RDALD V+ +HPGL+ KFGGHAMAAGL+L  
Sbjct: 374 RYHRPTIAFADAGDGLLKGSARSVPGFHIRDALDAVAAKHPGLISKFGGHAMAAGLSLPQ 433

Query: 438 DSFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWGQGFPAPT 496
            +FG F  AF+A  R  L +E L   + TDG +    F  E    L     WGQ FP P 
Sbjct: 434 ANFGAFAAAFDAEVRRQLCEEDLTGRLLTDGQLSVEEFHLELARALRNAGPWGQHFPEPM 493

Query: 497 FCGEFDVLRQSVLKGKHLKLQLGR--GSQRFDAIWFNHADSLGAS-----ALVAYRLDNN 549
           F G F +++Q ++  +HLKL L    GS   D I FN    +  +     A +AY+LD N
Sbjct: 494 FHGVFQLVQQRIVGERHLKLVLKSECGSLTLDGIAFNVDREIWPNPTVRWAELAYKLDVN 553

Query: 550 TFNGITRVQMVIEH 563
            + G   VQ+++ H
Sbjct: 554 EYRGQESVQLMVAH 567