Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 600 a.a., single-stranded-DNA-specific exonuclease from Sinorhizobium meliloti 1021

 Score =  259 bits (663), Expect = 2e-73
 Identities = 205/566 (36%), Positives = 282/566 (49%), Gaps = 35/566 (6%)

Query: 21  GLHPTLARILSARGVR---EPAELATELPGLAP-PAAMKGIDHAATYLADAIAAGRRLLI 76
           G    +AR+L+ RGV      A L   L  L P P  +     AA  LADAI    +++I
Sbjct: 44  GYSELIARVLAGRGVGLDDAAAFLEPTLRALMPDPDTLTDGRKAAERLADAIRRREKVVI 103

Query: 77  VADYDCDGATACAVGVRGLRMLGARIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVD 136
             DYD DGA + A+  R LR      +  +P+R   GYG  P+ +     +  ++IVTVD
Sbjct: 104 FGDYDVDGAASSALMARFLRHFDITAEIYIPDRIFEGYGPNPQAIDQLIDRGSELIVTVD 163

Query: 137 NGIASVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFY 196
            G  S + +A A     DVVV DHH  G  LP    +VNPN+        +L   GV++ 
Sbjct: 164 CGSTSHEALAVAAERRTDVVVIDHHQVGSVLPPCHALVNPNREDDLSGQGHLCAAGVVYL 223

Query: 197 VLLALRAELRRRGVFDAQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGR 256
           VL+     LR RG   A +   L +LLDLVAL TV DVV L   NR  V +GL   R   
Sbjct: 224 VLVNTLRVLRLRGDPRAASFDLL-SLLDLVALATVCDVVPLKGLNRAYVVKGLLAAR-HM 281

Query: 257 MHAGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIA 316
            +AG+AAL R A         + LGF +GPR+NA GR+ D +LG   L  D A  A  IA
Sbjct: 282 GNAGLAALLRKAAIGGP-VTPYHLGFLLGPRINAGGRIGDAALGSRLLTLDVAAAAEAIA 340

Query: 317 QELDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLK 376
            +LD +NR+R+ +EA M  EA   +    G  + A+   +      WH G++G++A+R+K
Sbjct: 341 SQLDELNRDRQAMEAAMLAEAEAEVLAEYGTGEGAS--VIVTARQNWHPGIVGLIAARIK 398

Query: 377 EKYHRP--TITFAPGDEDTIKGSGRSIPGFHL----RDALDLVSKRHPGLLKKFGGHAMA 430
           EK+ RP   I F P    T  GSGRSI GF +    R A+D       GLL K GGHAMA
Sbjct: 399 EKFRRPAFAIAFDPNGRGT--GSGRSINGFDMGRLVRAAVD------NGLLVKGGGHAMA 450

Query: 431 AGLTLGADSFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWG 489
           AGLT+     GQ  + FE      + D    + ++ DG +  A  + + V LL+Q   +G
Sbjct: 451 AGLTVERGKLGQLRQFFEERAETAIRDLVAVQTLKVDGALAAAGATLDLVDLLDQAGPYG 510

Query: 490 QGFPAPTFCGEFDVLRQSVLKG-KHLKLQL-GRGSQRFDAIWFNHAD---------SLGA 538
            G P P F      LR S   G  H+K+ L G+   R + I F  A+         + GA
Sbjct: 511 SGHPQPLFAFPQHRLRDSRQVGANHVKVTLEGQDGSRMEGIAFRAAETPLGDFLLGNRGA 570

Query: 539 SALVAYRLDNNTFNGITRVQMVIEHA 564
           +  VA  +  + + G  +VQ+ +  A
Sbjct: 571 TVHVAGSVSADLWQGTRKVQLRVTDA 596