Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 574 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Shewanella amazonensis SB2B

 Score =  520 bits (1338), Expect = e-152
 Identities = 286/552 (51%), Positives = 368/552 (66%), Gaps = 13/552 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           LHP + ++L+ RGV    +   EL  L  P  M G+D AA  LADA  A +R+LIV D+D
Sbjct: 20  LHPLIKQLLARRGVAGD-DCEQELSRLLRPETMLGLDRAACLLADAAMASKRMLIVGDFD 78

Query: 82  CDGATACAVGVRGLRMLGAR-IDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGAT+ +V +  L+MLG    D+++PNRF+YGYGL+  +VALA  +  +V++TVDNGI+
Sbjct: 79  ADGATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVDNGIS 138

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           S++GVAAA A G+ VV+TDHHLPG  LPDA  IVNPNQ GC F SK++AGVGV FY++LA
Sbjct: 139 SIEGVAAAKAAGMQVVITDHHLPGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFYLMLA 198

Query: 201 LRAELRRRGVFD--AQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMH 258
           LRAELRRRG F+     +P L  L+D+VALGTVADVV LD+NNRILV  GLKR+RAGR  
Sbjct: 199 LRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDANNRILVDAGLKRVRAGRCR 258

Query: 259 AGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQE 318
            G+ AL   A R   RA   D GF VGPRLNAAGRL +MSLG+E LL DD   A  +A E
Sbjct: 259 PGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARRMAAE 318

Query: 319 LDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEK 378
           LDG+N+ERR++E GMQ EAL+ LE  L   +    + ++++ D WHQGVIGI+ASR+K+K
Sbjct: 319 LDGLNQERRELETGMQAEALKSLE-RLQLEESQLPWGIALYQDDWHQGVIGILASRIKDK 377

Query: 379 YHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGAD 438
           YHRP I FA   ++ +KGS RSI G H+RD L+L+S RHPGL+ KFGGHAMAAGL+L   
Sbjct: 378 YHRPVIAFAEASDNEVKGSARSIKGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSLAKA 437

Query: 439 SFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWGQGFPAPTF 497
              +F   F+   RE LS E L   I +DG++     + E  +L+     WGQGF  P F
Sbjct: 438 DVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETANLIRASGPWGQGFEEPLF 497

Query: 498 CGEFDVLRQSVLKGKHLKLQLGR--GSQRFDAIWFNHADSLGASALV-----AYRLDNNT 550
            G F +L+Q ++  KHLK+ +    G    DAI FN    L   A V     AYRLD N 
Sbjct: 498 DGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWPDATVRHVHLAYRLDVNE 557

Query: 551 FNGITRVQMVIE 562
           F G   +Q+++E
Sbjct: 558 FRGNQSLQLLVE 569