Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 606 a.a., RecJ exonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score =  270 bits (691), Expect = 9e-77
 Identities = 207/562 (36%), Positives = 297/562 (52%), Gaps = 31/562 (5%)

Query: 21  GLHPTLARILSARGVR-EPAE--LATELPGLAP-PAAMKGIDHAATYLADAIAAGRRLLI 76
           G+   + R+L+ RGV+ E A+  L   L  L P P  +  +D A   L+ A+     + I
Sbjct: 50  GVPEVVGRVLTGRGVQVEEADGFLTPTLRALLPDPGHLLDMDKAVARLSKAVRDKETIAI 109

Query: 77  VADYDCDGATACAVGVRGLRMLGARIDYIVPNRFEYGYGLT-PEIVALAARQQPDVIVTV 135
             DYD DGAT+ A+  R  R LGAR+   +P+R   GYG   P + ALAA+    V++TV
Sbjct: 110 FGDYDVDGATSTALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAKGAR-VVLTV 168

Query: 136 DNGIASVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMF 195
           D GI++ D + AA A G+DVVV DHH    +LP A  +VNP +     P  +LA VGV F
Sbjct: 169 DCGISAFDALRAAKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAF 228

Query: 196 YVLLALRAELRRRGVFDAQTQPRLD--TLLDLVALGTVADVVKLDSNNRILVAQGLKRMR 253
            + +A+  +LR  G F A+ +P  D   LLDLVALGTV D+V L   NR LV QGLK + 
Sbjct: 229 LMAVAINRDLRDSGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLK-VI 287

Query: 254 AGRMHAGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAW 313
           A R + G+AAL   +G    R + F LGF +GPR+NA GR+    +G   L ++D     
Sbjct: 288 AKRTNPGIAALAEVSG-VRDRVDAFHLGFMLGPRVNAGGRVGQAGMGAALLSSEDPLECL 346

Query: 314 EIAQELDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDT-WHQGVIGIVA 372
           + A++LD  N  R++IEA +  +A++ +E       PA    +   + T WH GV+GIVA
Sbjct: 347 DFARQLDAFNGARKEIEAAVLHQAIEQVEAA-----PANDLPLVFASGTDWHPGVVGIVA 401

Query: 373 SRLKEKYHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAG 432
           SRLKE+Y  P    A  D    KGSGRS+ G  L     +++ R  G+L+  GGHAMAAG
Sbjct: 402 SRLKERYGLPACAVAL-DGGLAKGSGRSVGGVDLGRV--VIAAREAGVLEAGGGHAMAAG 458

Query: 433 LTLGADSFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWGQG 491
            +L  D   +F +      ++ ++   L   ++ DG ++    + + V  L Q   +G G
Sbjct: 459 FSLRTDRLEEFRQFLGERLKDQVAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSG 518

Query: 492 FPAPTFC-GEFDVLRQSVLKGKHLKLQL-GRGSQRFDAIWFNHADS---------LGASA 540
            P P F      V +  V+   H++  L G       A+ F  ADS          GAS 
Sbjct: 519 NPEPRFAVANARVGKVDVVGMGHVRCFLNGPSGGSLKAMAFKAADSEIGHALLTAHGASL 578

Query: 541 LVAYRLDNNTFNGITRVQMVIE 562
            VA  L  ++F G   V +V++
Sbjct: 579 HVAGTLRLDSFQGRETVVLVVD 600