Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 565 a.a., single-stranded-DNA-specific exonuclease RecJ from Dechlorosoma suillum PS

 Score =  639 bits (1647), Expect = 0.0
 Identities = 336/565 (59%), Positives = 407/565 (72%), Gaps = 6/565 (1%)

Query: 1   MTKIAVRSFSTEHAGKLAGFGLHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHA 60
           MT++  R        +L   GLHP LARI +ARG++  AEL  +L  L PP+ + G + A
Sbjct: 1   MTQLIARPVPPRPQWQLEQEGLHPLLARIYAARGIKHKAELDYDLKSLIPPSQLTGTEEA 60

Query: 61  ATYLADAIAAGRRLLIVADYDCDGATACAVGVRGLRMLGARIDYIVPNRFEYGYGLTPEI 120
           A  LADAI A  R+L+V DYDCDGATA AV VR LR+LG  +DY+VP+RF +GYGL+P+I
Sbjct: 61  AILLADAIEAEARILVVGDYDCDGATATAVAVRALRLLGGTVDYLVPDRFVHGYGLSPQI 120

Query: 121 VALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPG 180
           V LAA +QPD++VTVDNGIAS++GV AA  LGI  ++TDHHLP + LP+A  IVNPNQPG
Sbjct: 121 VELAAERQPDLLVTVDNGIASIEGVEAARQLGIATLITDHHLPAETLPEADCIVNPNQPG 180

Query: 181 CEFPSKNLAGVGVMFYVLLALRAELRRRGVFDAQ-TQPRLDTLLDLVALGTVADVVKLDS 239
           C FPSK LAGVGVMFYV LALRAE+RRRG F  +  +P    LLDLVALGTVADVVKLD 
Sbjct: 181 CTFPSKALAGVGVMFYVALALRAEMRRRGAFGPERPEPNFSCLLDLVALGTVADVVKLDH 240

Query: 240 NNRILVAQGLKRMRAGRMHAGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSL 299
           NNRILVAQGLKRMR G++  G+ ALFRAAGR    A+ FDLGF VGPRLNAAGRL+DMSL
Sbjct: 241 NNRILVAQGLKRMREGKLTPGIRALFRAAGRNLQTASAFDLGFTVGPRLNAAGRLSDMSL 300

Query: 300 GIECLLTDDANRAWEIAQELDGMNRERRDIEAGMQQEALQILEGPLGALD-PAARFTVSV 358
           GIECL+TDD  RA  IAQ+LD +NRERR+IEAGMQ++AL  LE      D  A+   V++
Sbjct: 301 GIECLITDDEARAANIAQQLDQLNRERREIEAGMQEQALIHLEN----FDLEASGAGVAL 356

Query: 359 FNDTWHQGVIGIVASRLKEKYHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHP 418
           F+  WHQGV+GI+ASR+KEK HRP   FA GD+  IKGSGRSIPG HLRDALDLVSKR P
Sbjct: 357 FDPDWHQGVVGILASRIKEKLHRPVFAFARGDDGQIKGSGRSIPGLHLRDALDLVSKRAP 416

Query: 419 GLLKKFGGHAMAAGLTLGADSFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPE 478
           G+L +FGGHAMAAG TL  + F +F   F  V  E L+   L R +ETDG +E    S +
Sbjct: 417 GILLRFGGHAMAAGATLMEERFEEFKSLFAQVADELLNPADLTRTLETDGALEAGYISLQ 476

Query: 479 FVSLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRFDAIWFNHADSLGA 538
              +L  +VWGQGFPAP F   F+V  Q VLK KHLKL+L +     +AI FN  ++ G 
Sbjct: 477 VAEMLAGEVWGQGFPAPLFEDVFEVESQRVLKDKHLKLRLKKERSVLEAIQFNATENPGP 536

Query: 539 SALVAYRLDNNTFNGITRVQMVIEH 563
            A +AYRL  N +NG+   Q+V+EH
Sbjct: 537 RARLAYRLTINDYNGVQTPQLVVEH 561