Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 577 a.a., ssDNA exonuclease RecJ from Klebsiella michiganensis M5al

 Score =  475 bits (1223), Expect = e-138
 Identities = 264/553 (47%), Positives = 351/553 (63%), Gaps = 12/553 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           L P L R+ ++RGVR   EL   + G+ P + + G++ A   L  A   G  +++V D+D
Sbjct: 22  LPPLLQRLYASRGVRSAQELERGVKGMLPWSQLTGVEKAVEILYGAFKQGLHIVVVGDFD 81

Query: 82  CDGATACAVGVRGLRMLG-ARIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGAT+ A+ V  LR LG   + Y+VPNRFE GYGL+PE+V  A  +   +I+TVDNGI+
Sbjct: 82  ADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQLIMTVDNGIS 141

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           S  GV  A+ALGI V+VTDHHLPGD LP A  I+NPN   CEFPSK+LAGVGV FY++LA
Sbjct: 142 SHAGVDHAHALGIPVLVTDHHLPGDSLPAAEAIINPNLRDCEFPSKSLAGVGVAFYLMLA 201

Query: 201 LRAELRRRGVFDAQ--TQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMH 258
           LR  LR +G F+ +    P L  LLDLVALGTVADVV LD+NNRIL  QGL R+RAG+  
Sbjct: 202 LRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCR 261

Query: 259 AGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQE 318
            G+ AL   A R+  +    DLGF +GPRLNAAGRL DMS+G+  LL D+   A  +A E
Sbjct: 262 PGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNTGEARVLANE 321

Query: 319 LDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEK 378
           LD +N+ R++IE GMQ EAL + E  L          +++++  WHQGV+GI+ASR+KE+
Sbjct: 322 LDALNQTRKEIEQGMQAEALTLCE-KLERSGETLPGGLAMYHPQWHQGVVGILASRIKER 380

Query: 379 YHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGAD 438
           +HRP I FAP  + T+KGSGRSI G H+RDAL+ +   +PGL+ KFGGHAMAAGL+L   
Sbjct: 381 FHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYPGLIMKFGGHAMAAGLSLEEA 440

Query: 439 SFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLL-EQQVWGQGFPAPTF 497
            F +F + F  +  EWL    L   + +DG +  A  S E   +L +   WGQ FP P F
Sbjct: 441 RFEEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSMEVAQMLRDAGPWGQMFPEPLF 500

Query: 498 CGEFDVLRQSVLKGKHLKLQLG--RGSQRFDAIWFNHADSLG-----ASALVAYRLDNNT 550
            G F +L+Q ++  +HLK+ +    G    D I FN   SL          +AY+LD N 
Sbjct: 501 DGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTSLWPDNGVREVQLAYKLDINE 560

Query: 551 FNGITRVQMVIEH 563
           F G   +Q++I+H
Sbjct: 561 FRGNRSLQLIIDH 573