Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 606 a.a., single-stranded-DNA-specific exonuclease recJ from Caulobacter crescentus NA1000

 Score =  288 bits (737), Expect = 4e-82
 Identities = 214/564 (37%), Positives = 294/564 (52%), Gaps = 30/564 (5%)

Query: 21  GLHPTLARILSARGVR-EPAE--LATELPGLAP-PAAMKGIDHAATYLADAIAAGRRLLI 76
           GL   LA+ L +RGV  E AE  L   L  L P P+    +D AA  L DA+  GR  ++
Sbjct: 44  GLIEPLAKALVSRGVTLEHAEHYLRPTLKALFPDPSLFTDMDRAAEILIDALERGRPTMV 103

Query: 77  VADYDCDGATACAVGVRGLRMLGARIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVD 136
            ADYD DGAT+ A  VR  R +G  +   +P+R   GYG +P           +++VT+D
Sbjct: 104 FADYDVDGATSAAQLVRWFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVVTLD 163

Query: 137 NGIASVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFY 196
            G A+ D +A+A  +G++VVV DHHL  +  P AA +VNPN+PGC      LA  GV F 
Sbjct: 164 CGAAAYDAIASAGEIGLEVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFV 223

Query: 197 VLLALRAELRRRGVF-DAQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAG 255
           +L AL  E R+RG+F + + QP     LDLVALG V DV +L   NR L A GL+ M A 
Sbjct: 224 LLTALNREARKRGLFTEDRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAW 283

Query: 256 RMHAGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEI 315
             + G+ ALF   G+ +   + F  GF +GPR+NA GR+    LG   L TDD   A  +
Sbjct: 284 -ANPGLKALFE-VGKGSGEPSVFTAGFILGPRINAGGRVGRSDLGARLLSTDDPLEARAL 341

Query: 316 AQELDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRL 375
           A+ELD +N ER+ +EA + +EA  +LE      +P A   V V  D WH GVIGIVA RL
Sbjct: 342 AEELDSLNTERKAVEAAVVEEAAAMLERG-SNFNPDAPVIV-VAGDDWHPGVIGIVAGRL 399

Query: 376 KEKYHRPTITFAPGDEDTI-KGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLT 434
           +E+Y +P +         + KGSGRS  G +L  A+    +   GLL   GGHAMAAGL+
Sbjct: 400 RERYRKPVVVIGIDRAANVGKGSGRSQSGVNLGRAIQAAFE--AGLLMAGGGHAMAAGLS 457

Query: 435 LGADSFGQFMEAFEAVGREWLSDEQLA---RVIETDGDIEDACFSPEFVSLLEQQV-WGQ 490
           +  +   +F    E    E L+ E  A     +E D  ++    +   +   ++   +G 
Sbjct: 458 IRPEMIPEFRAFLE----ERLAGEMEAVGVEAVEVDALVQPRAANRALLDDFQRLAPFGP 513

Query: 491 GFPAPTFC-GEFDVLRQSVLKGKHLKLQL-GRGSQRFDAI-WFNHADSLGASAL------ 541
           G P P F   +    R S LKG H+++ L G    R  AI W +    LG   L      
Sbjct: 514 GNPEPLFALSQVRPERVSALKGGHVRMDLVGPTGDRIKAISWRSAETPLGQRLLAGGGPL 573

Query: 542 -VAYRLDNNTFNGITRVQMVIEHA 564
            V  +L  + + G   VQ+ IE A
Sbjct: 574 DVVGKLKPDDYMGRNGVQLEIEDA 597