Pairwise Alignments

Query, 241 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

Subject, 246 a.a., DNA-binding regulatory protein, YebC/PmpR family from Phaeobacter inhibens DSM 17395

 Score =  214 bits (546), Expect = 1e-60
 Identities = 113/237 (47%), Positives = 156/237 (65%), Gaps = 3/237 (1%)

Query: 1   MAGHSKWANIKHKKAAADSRRGKVWTRLIKEITVAAKLGGADPDSNPRLRLSMDKAMDAN 60
           MAGHSKWANI+H+K   D+ R K++++L KEITVAAK+G  DP+ NPRLRL++ +A   +
Sbjct: 1   MAGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKMGDPDPEKNPRLRLAVKEAKSQS 60

Query: 61  MPKDNIQRAIQRGVGGLEGANYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKN 120
           +PKD I RAI++   G EG +YEEIRYEGYG  G A+IV+ +TDNR RT + VR  FSKN
Sbjct: 61  VPKDVIDRAIKKSTAG-EGDDYEEIRYEGYGPNGVAVIVEAMTDNRNRTASTVRSTFSKN 119

Query: 121 SGNMGAEGSVAFMFTHCGQFLFAPGTPE-DKLMEAALEAGADDVVTNDDGSIEVLCPPND 179
            GN+G  GSV FMF   G+  ++    + D +M AA++AGA+DV +++DG + + C   D
Sbjct: 120 GGNLGETGSVGFMFDRKGEVTYSATVGDADTVMMAAIDAGAEDVDSSEDGHV-IYCADTD 178

Query: 180 FGTVKAALEAAGFKAEMADVTMKPQNEVSFAGDDAIKMQKLLDALENLDDVQEVFTN 236
              V  ALE    +++   +  KP        +   K+ KL+DALE+ DDVQ V TN
Sbjct: 179 LNEVSNALEGELGESDSTKLVWKPTTTTELDLEGMQKLMKLVDALEDDDDVQRVTTN 235