Pairwise Alignments

Query, 822 a.a., type VI secretion protein ImpA from Cupriavidus basilensis FW507-4G11

Subject, 848 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  456 bits (1174), Expect = e-132
 Identities = 292/835 (34%), Positives = 437/835 (52%), Gaps = 56/835 (6%)

Query: 16  RTVSVSSAAIPDLLG------------QPQLEFVRLSGHEGLSELFTYKVDLRPVSPAAE 63
           RT++ S AA+P+++G            +P L   RL G E + ELF Y V+    +P   
Sbjct: 9   RTLTFSGAALPEIIGVDYRSRQCIEIREPMLTVRRLRGREAVGELFEYVVETEVENPDFL 68

Query: 64  Q---FLAEADPDEMIGREMTVTIELDGMGTGLLGG--------IGAGHREITGVISEIEQ 112
           Q    +A+ D   ++G   TV I++ G+GT   G         +GA  R I G I     
Sbjct: 69  QDPESVAQLDLAAIVGTSGTVAIQVAGIGTFRAGAKGDTGRANVGADTRYINGEIVSARI 128

Query: 113 VGGAAENRLYRFTLRPWLWLATQTSDFKPFQKKTVIEILDEVLADYPFSVEKRLDVSI-- 170
                   ++ F LRP++W AT   D + F   TVIE+L+EVL  Y  +VE R+      
Sbjct: 129 RCVEDRAAVFEFVLRPFVWRATLNCDSRIFHG-TVIEVLEEVLQPYVGTVEWRIGGMWPG 187

Query: 171 --YPKLVWEVQSGETDAHFIQRLTEEYGITYFFEHDGGHHRLILASETGAFRNFPSEAYH 228
             YP      Q+ E D  F   L EE+G+ Y+FEH    H L+++     FR     AY 
Sbjct: 188 KGYPPRDMIRQAWEPDWQFASFLMEEFGLFYWFEHRDDFHSLVISDLLSGFRPH-GVAYE 246

Query: 229 TLPIYPHGFKVDQEHLVRLDPVNRLRTGKVTLNDYDFRKPR-ADLTTGNSQP----RETG 283
           TL  Y  G ++D+EH+  L     L  GK T+ND+++ +PR A     N +     R T 
Sbjct: 247 TLR-YHTGSRIDEEHISELSIAYTLTPGKATVNDHNYAEPRLAKSLVPNRETCEDTRGTA 305

Query: 284 FADFERYEYPGDYVEPAV-------------GDMRARIRMEERRARGRRVRGVGALRGVA 330
             D E YE P D+ +P               G   AR++++ RR +  R  G G L+ + 
Sbjct: 306 SRDIEIYE-PADFAQPEARRTAADANDERGEGQHLARVKLQSRRCQSLRATGRGRLQALQ 364

Query: 331 PGCTYMVSNHGNPALNREFLVTSTAFDLEDVGGASGSRQRFACRVAFEGHPTDEVFRPPR 390
           PG T+ ++ +     N E++V S   D+ +VG +SG  +++     FE  P +E FR P+
Sbjct: 365 PGRTFTLAGYPQERANCEYIVLSCDLDMTEVGTSSGPTRQYTVNTEFELQPANEYFRLPQ 424

Query: 391 TVGKPRVAGLQRAVVTGPKNQEIWCNEHGSVNIQFEWDRYGKHDENSSPWIRVVNGWSGD 450
              +PR+ G + AVV  P+++E++ +    + IQF+WDR    D  +S W+RV+  W G 
Sbjct: 425 VTPRPRIDGYEYAVVVAPQDKEMYIDYRNRLRIQFDWDRQANLDGATSIWVRVMTQWQGG 484

Query: 451 QFGAMHIPRIGQEVIVAFLNGDPDCPLIVGRAPNQHNMSPWALPGQHALSGIRSKEL-FG 509
           + G +   R GQ V+V+ ++GDPD P++ G   ++ NM PW LP   ALSG+RSK L +G
Sbjct: 485 ELGVVAPGRAGQMVLVSHVHGDPDRPVVAGFVVDKFNMPPWELPANAALSGMRSKSLGYG 544

Query: 510 GRHNHLLMDDTKDQIQSQLSSDHQLSQLNLGYLTNVPDHAGRKDHRGEGAELRTDGHMAL 569
            R NHL +DDT  ++Q+QL+SD   S+   G+ T +    GR + RGEG E+ TD H+  
Sbjct: 545 LRSNHLALDDTPGKMQAQLASDQANSRFVAGFNTRIDGTKGRTEARGEGIEIATDAHLVG 604

Query: 570 RSGAGTLVSTELRTHGQGAALDLSEAMDRLRGALSLAEQLQQASVQAQAQ-RDEQEGVAK 628
           R   G L+++E R        D+ E + RL  A    E L + ++Q  AQ  D  +G A 
Sbjct: 605 RGNQGVLLTSEARVGASAPVKDMGETVARLTQARQQHEDLSRLAIQHNAQTMDASQGDAT 664

Query: 629 A-IARQNDAIKG----DQSPSGTLAEPHIVVASAAGIVATATTDTHLHSSRHATITTGEH 683
           + I  QN+AI+G    +++PS  +  P +V+ASAAGI  TA   TH+ S +   IT G  
Sbjct: 665 SMIKAQNEAIRGGQKTEENPSPEMTRPDVVLASAAGIATTAADSTHMASVKDHAITAGRD 724

Query: 684 LSLNTGKGFFASVRGMFSLCAHLLGIRLFAAKGPITLQAQNDVMQFFAKLGIDIISTDDN 743
           +S+++G+  FASVRG  SL A+ LG++L AAKG + +QAQ+D M   A   + I STD  
Sbjct: 725 VSVSSGRSLFASVRGAISLFAYQLGLKLIAAKGKVDIQAQSDQMALAALNDLTISSTDGR 784

Query: 744 IRILARKELLIGGGSSHTRYNDGGITHLTRATITAHAAGHSFTGPSTETVAWPKL 798
           I + A KE+ +G G S+ + +  GI + +   I    A     GP T+ V  P L
Sbjct: 785 IVLTAAKEIWLGAGGSYIQIDGSGIINGSPGAILERGATWDVPGPDTQRVRVPDL 839