Pairwise Alignments

Query, 306 a.a., recombinase XerD from Cupriavidus basilensis FW507-4G11

Subject, 298 a.a., recombinase XerD from Pseudomonas fluorescens FW300-N2C3

 Score =  293 bits (749), Expect = 4e-84
 Identities = 160/301 (53%), Positives = 200/301 (66%), Gaps = 13/301 (4%)

Query: 12  DLALVDRFCDALWLEDGLAQNTIDAYRRDLALLSRWLHASGTCALLAVDDTALNGYFASR 71
           D  L+D+F DALWLE GL+ NT DAYR DLAL + WL  +    + A  +  L+      
Sbjct: 5   DHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFNGWLQENHLELVNAGRELILD------ 58

Query: 72  HLATRAS------SANRRLTVFKRFFQWALREHMITADPCLLLRPAKQPPRFPKTLTEAQ 125
           HLA R        S  R L+  + F+++ LRE +I  DP L +   +     PK+L+EA 
Sbjct: 59  HLAWRLEQNYKPRSTARFLSGLRGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEAD 118

Query: 126 VEALLETPDTATPLGLRDRTMLELMYASGLRVSELTQMKTIEISLNEGVARVVGGKGNKE 185
           VEALL  PD +  +G RDR MLE++YA GLRV+EL  +   +++L +GV RV+G KG+KE
Sbjct: 119 VEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMG-KGSKE 177

Query: 186 RLVPFGTEAGDWLRRYLAEGRPALLGERACEALFVTQRGEGMTRQAFWHLIKRHAREAEI 245
           RLVP G EA  W+ RY+ + R  LLG R  + LF + RGE MTRQ FWH IK  A+ A I
Sbjct: 178 RLVPMGEEAIVWVERYMRDARHELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGI 237

Query: 246 YAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRELHQHHHPR 305
              LSPHTLRHAFATHLLNHGADLRVVQ+LLGH+D+STTQIYTHVAR RL+ LH  HHPR
Sbjct: 238 GKSLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQNLHAKHHPR 297

Query: 306 G 306
           G
Sbjct: 298 G 298