Pairwise Alignments

Query, 306 a.a., recombinase XerD from Cupriavidus basilensis FW507-4G11

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Pseudomonas sp. BP01

 Score =  301 bits (772), Expect = 9e-87
 Identities = 162/300 (54%), Positives = 200/300 (66%), Gaps = 3/300 (1%)

Query: 7   PALLGDLALVDRFCDALWLEDGLAQNTIDAYRRDLALLSRWLHASGTCALLAVDDTALNG 66
           PAL  D  L+D+F DALWLE GL+ NT  +YR DLAL + WL         A  D  L+ 
Sbjct: 2   PAL--DHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDH 59

Query: 67  YFASRHLATRASSANRRLTVFKRFFQWALREHMITADPCLLLRPAKQPPRFPKTLTEAQV 126
                    +  S  R L+  + FF++ LRE ++  DP L +   +     PK+L+EA V
Sbjct: 60  LAWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADV 119

Query: 127 EALLETPDTATPLGLRDRTMLELMYASGLRVSELTQMKTIEISLNEGVARVVGGKGNKER 186
           EALL+ PD    +G RDR MLE++YA GLRV+EL  +   +++L +GV RV+G KG+KER
Sbjct: 120 EALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMG-KGSKER 178

Query: 187 LVPFGTEAGDWLRRYLAEGRPALLGERACEALFVTQRGEGMTRQAFWHLIKRHAREAEIY 246
           LVP G EA  WL RY  +GR  LL  R  + LF +QRGE MTRQ FWH IK HAR A I 
Sbjct: 179 LVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGID 238

Query: 247 APLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRELHQHHHPRG 306
            PLSPHTLRHAFATHLLNHGADLRVVQ+LLGH+D+STTQIYTHVA+ RL++LH  HHPRG
Sbjct: 239 KPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG 298