Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 559 a.a., DEAD/DEAH box helicase from Ralstonia sp. UNC404CL21Col

 Score =  739 bits (1908), Expect = 0.0
 Identities = 404/569 (71%), Positives = 441/569 (77%), Gaps = 21/569 (3%)

Query: 1   MSFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60
           MSFSELGLSDKL+RAVAE GY  PTPIQ QAIPAILKGGDLLAGAQTGTGKTAGFTLPLL
Sbjct: 1   MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60

Query: 61  QLLSESSAGR-EPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGI 119
             LS S   + +  +G R P+RALVLTPTRELAAQVEESVR YGKYL L+SMVMFGGVGI
Sbjct: 61  HRLSASQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI 120

Query: 120 NPQIEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILN 179
           NPQI+ LKRGVDIVVATPGRLLDH+ QRTIDL+H+E+LVLDEADRMLDMGFIHDIRKILN
Sbjct: 121 NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN 180

Query: 180 VLPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKREL 239
           +LPPKRQNLLFSATFSD+IR LADRLLD PA IEVARRNTTAETV QR+YPVDRERKREL
Sbjct: 181 ILPPKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL 240

Query: 240 LAHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGT 299
           LA LVR+NDWHQVLVFTRTKHGANRLAEQL +DG+ ALAIHGNKSQSARTRALTEFKAGT
Sbjct: 241 LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGT 300

Query: 300 LRLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEIS 359
           LR+LVATDIAARGIDIDQLPHVVN+DLPNVPEDYVHRIGRTGRAGA+GEAISLVCVDE  
Sbjct: 301 LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG 360

Query: 360 LMRDIERLIKRQIEQTILPGFEVDPSIPAEPIQKGRQARGQGQGNGGGR---GRGQAP-- 414
           L+RDIERLIKR++ +T+L GFE DP+I AEPI  GR + G+G    GGR   GR Q P  
Sbjct: 361 LLRDIERLIKRELPRTVLEGFEPDPTIAAEPIPNGRNSAGRGGNARGGRPGGGRSQQPRQ 420

Query: 415 AGGQPRGRAPAADAGERQQRPARAPQGRGQAPAAADGQGQRRAPQAPGQRPAQGSGRPAS 474
           A G    R P A    R+  P R   G GQ      GQGQ R      QR AQG     +
Sbjct: 421 ASGNAAPREPRAPREPRE--PRRESSGNGQGQGQNQGQGQGRNGGGSRQRQAQGQRDGQA 478

Query: 475 AGQGNPRNGQANGNRTGEANGNRAAGNGNGNGNGNGNGNRDRNGDVNGNRAGVNTHAAQP 534
           A +  PRNG   GN   +A G R  GNG G G G GNG   + G     R   NT AAQP
Sbjct: 479 APK--PRNGHGAGNGQSQARGQR-QGNGQGQGQGKGNGQGGQGGQ---QRRASNTQAAQP 532

Query: 535 RTGQDPARGRRP-----APQAALLGGQRA 558
                PA  ++P     A  AALLGG++A
Sbjct: 533 AHKGQPA--KQPFNGLFAKAAALLGGRKA 559